Carassius gibelio (silver crucian carp): 127979026
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Entry
127979026 CDS
T08819
Name
(RefSeq) syndecan-3-like
KO
K16337
syndecan 3
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04514
Cell adhesion molecule (CAM) interaction
cgib04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
127979026
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
127979026
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cgib00535
]
127979026
Proteoglycans [BR:
cgib00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
127979026
SSDB
Ortholog
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GFIT
Motif
Pfam:
Syndecan
SDH8
PepSY_2
Motif
Other DBs
NCBI-GeneID:
127979026
NCBI-ProteinID:
XP_052440088
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All DBs
Position
B19:23306236..23334690
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AA seq
393 aa
AA seq
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MKLLCWMALALLLLAQTALAQRRTSRPRDDESSGDEFYDDEDLFSGSGSGFPDVDISPTS
ASVMVTTEEPLPLSTTQATGPAPSASPAAEPSSPPPPEVERESSLGQDVDRDGKEEQESK
ILTTLEPDKDEEEQERSKATVAPRLTDVPLVFVDSSTALVETTVASSDLEDLFTTEEEDL
FLTTETIMLETSSTPETTTDDITTTEVIPTTVASTTAKPTRPRPTPTTPSTAPIRPRKPH
TTPSRATPTESSTRSVMTTTQTQTTDETVNNEVAGPSPSGDFEISENGVRQGNEVRRGKG
VPGLAAEPDLTGNTVDAAGSSAAQLPQKNILERKEVLIAVIVGGVVGALFAAFLVMLLVY
RMKKKDEGSYTLEEPKQATVTYQKPDKQEEFYA
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcctgtgctggatggcgctggcgctgctgctgctggcgcagactgccctggca
cagcgacgcacgtctcgaccaagagatgatgagagttctggagatgaattttacgacgat
gaggacttattctctggatccggctctggctttccagatgtggacattagtccaacttca
gcaagtgtgatggtcactacagaagagcccctcccactttctaccacacaggccactggc
cccgccccctcggcctcccccgccgccgagccaagtagcccacctccacctgaggtggaa
cgcgagagcagcttgggacaagatgtagacagagacggcaaggaggaacaggaatctaaa
atcctaacaactttagaacctgataaagatgaagaggaacaagagagatcgaaagctacg
gttgccccccggctgactgatgttcctctagtgttcgtggactcatccaccgctctggtt
gagactacagtggccagtagtgatctggaggacctcttcaccacagaagaagaggatcta
ttccttactacagaaaccatcatgttagagacttccagcacaccggagacaacaacagat
gacatcacaaccactgaggtcatcccaaccactgttgcatccaccactgctaagccaacc
agaccacgtcctactccgaccactccgagcaccgcccccatacgaccccggaaaccccac
actacccccagtagagccaccccgactgagagcagcactcgatcagtgatgaccacaaca
cagacacaaacaacagatgaaaccgtaaataatgaagttgcaggaccaagtccaagtggt
gattttgaaatcagcgagaatggagttcgccaaggcaacgaggtcaggagaggcaaaggg
gtgcctggcctggcagcagaaccagatctgactggtaacacagtagatgctgctgggagc
tcagccgctcaacttccacagaagaacatccttgagaggaaggaggttttgatagccgtg
attgtcggaggtgttgttggagcactcttcgcagcattcctcgtaatgttactcgtctac
cggatgaaaaagaaagatgaaggcagctacacattggaggagcctaaacaagccaccgtc
acctaccagaaaccggacaagcaggaagaattctacgcctaa
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