Carassius gibelio (silver crucian carp): 127979117
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Entry
127979117 CDS
T08819
Name
(RefSeq) sorting nexin-27-like
KO
K17936
sorting nexin-27
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127979117
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cgib04990
]
127979117
Membrane trafficking [BR:
cgib04131
]
Protein recycling
Others
Others
127979117
Domain-containing proteins not elsewhere classified [BR:
cgib04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
127979117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
PDZ_6
RA
RA_2
SNX17-27-31_F1_FERM
SNX17_FERM_C
PDZ_2
SNX17-31_F2_FERM
USP7_C2
DarA_N
RBD
Motif
Other DBs
NCBI-GeneID:
127979117
NCBI-ProteinID:
XP_052440249
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All DBs
Position
B19:complement(28516257..28529395)
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AA seq
556 aa
AA seq
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MAEIEGDETARPAAAPRVNGSGNQTPTMVTSGPRMVRIVKSESGYGFNVRGQVSEGGQLR
SINGELYAPLQHVSAVLPGGAADRAGIVKGDRILEVNGVSVEGATHKQVVDLIRAGEREL
VLTVLSVPAQEADGLEGGEESSVQPNYDYSDKQAVPISIPTYKHVEQHSEKFVVYNVYMS
GRQLCSKRYREFVILHQNLKREFSNYNFPKLPGKWPFSLSEQQLDARRRGLEEYMERVCS
VRVIGESDIMQEFLSESNENNNGISDVELRIALPDKTTASVRVRKNSTTDQVYQALVIKV
GMDSIMASYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLTMRKWLFSTQEEE
LLRDNPLGLHYCFHQAQDDVKKGFIKAEDKAYQLQKLAEQRKMTTYLSLLRSCEGYNEVM
FPHCACDSRRKGHVITAISMKHFKLHACTEDGTLENQVIVFEWSEMQRWDTDEEGMAFCF
EYVRGEKKPRWVKIFTPYFNYMHECFERIFCELKWRKEVEDEASDKGNKNCSNNDYLSPL
EQQKGWRHLGGEIATS
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaatcgagggagatgagactgctcggcccgcagcagcgccccgcgttaacggc
tctggtaaccagaccccgaccatggtgacctcgggtccgcgtatggttcggatcgtgaag
tcggaatcgggatacggattcaacgtccgcggtcaagtgagtgaaggcggccagctgcgg
agcattaacggggagctgtacgctcctctccagcatgtcagcgccgtgttacccgggggt
gcggcggaccgggccggtatagtgaaaggagaccgaatactagaggttaacggggtgagc
gtggagggggcgacgcacaagcaggtggtggatctgatcagggctggagagagggagctg
gtgttgaccgtgctctctgtgccggcacaggaagcagacggacttgaaggaggcgaggaa
agctccgtgcagcccaattacgactacagcgacaagcaggccgtccccatttcaatcccc
acatacaaacatgtggaacagcactcggagaagtttgtggtgtataatgtgtacatgtcg
ggcagacagctgtgttcgaagcgttacagggagtttgtgattcttcatcagaacctgaag
agagagttttccaactacaatttcccaaagcttccagggaaatggcccttttctctgtct
gaacagcagctggacgctcggaggagggggttggaggaatacatggagagagtgtgttca
gtgcgggtcattggtgagagtgacattatgcaagaattcctgtctgaatcgaatgagaac
aacaacggcataagtgatgtcgagctacgaatagcactgcctgataaaaccacagcttca
gtaagagtaagaaagaacagcaccactgaccaggtctaccaggctcttgtcataaaggtt
gggatggacagcatcatggccagttactttgctctctttgaagttattaaccactcgttt
gtgcgcaaattggctcctaatgagttcccgcacaagctctatgttcagaactacacctct
gccgtgcccgggacgtgtctcacaatgcggaagtggctcttcagcacacaggaagaggaa
ctgctgcgggacaaccctcttggcctgcactactgcttccatcaggcacaggatgatgtg
aagaagggcttcattaaagcagaggataaagcgtaccagctgcaaaaactagcagaacag
agaaagatgacaacgtatctgagtcttttgcgctcatgtgagggatataatgaggtgatg
ttccctcactgtgcatgtgactcacggaggaaaggtcatgtgatcacagccatcagtatg
aagcatttcaaactgcacgcctgcacagaggacggcactcttgagaatcaggtgatcgtc
ttcgaatggtcagagatgcagagatgggacaccgatgaagaggggatggccttctgtttt
gaatatgtgcgtggagaaaagaaacctcgctgggtcaaaatattcactccttattttaac
tacatgcacgagtgctttgagaggattttctgtgagctcaaatggaggaaagaggttgaa
gacgaggcctcggacaaaggcaataaaaactgtagtaataatgattacctctcgccactg
gagcagcagaagggatggcgccacctagggggcgagatcgccacttcctaa
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integrated database retrieval system