Carassius gibelio (silver crucian carp): 127979128
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Entry
127979128 CDS
T08819
Name
(RefSeq) low-density lipoprotein receptor-related protein 12-like
KO
K20050
low-density lipoprotein receptor-related protein 3/10/12
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127979128
Membrane trafficking [BR:
cgib04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
127979128
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CUB
Ldl_recept_a
Motif
Other DBs
NCBI-GeneID:
127979128
NCBI-ProteinID:
XP_052440277
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All DBs
Position
B19:12324176..12336481
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AA seq
875 aa
AA seq
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MAYTSSLNQVCLLWTHLLLIFMGNTVSSQHSENVYVSSMSNACGDVAEQIRASSGVITSP
GWPFEYPSHINCSWNIRANPGEIITISFQDFEIQSSHRCGLDWISIGTYKNLDGYRACGS
TIPAPYISSQDHVWIKFHSDDSTTAKGFRLSYITGKSEEASCKPEQFHCANGKCIPESWK
CNTMDECGDNSDEELCVQPNPSSFFSFQPCAFNQFPCLSRYTRVYTCLPESLKCDGSIDC
QDLGDEIDCDVPTCGEWLRNFYGTFSSPNYPDFYPPGSNCTWLIDTGDHRKVILRFMDFK
LDGTGYGDYVKVYDGLEENPRRLLRVLTAFDSRAPVAVVSSSGQLRIHFYADKINAARGF
NVTYQVEGFCLPWEIPCGGNWGCYTEQQRCDGYWHCPNGRDELNCSNCQEDEFPCSRNGA
CYPRSDRCNYQNRCPNGSDEKNCFFCQPGNFHCKNNRCVFESWVCDAQDDCGDGSDEESC
PVIVPTRVITAAVIGSLICGLLLVIALGCTCKLYSLRMFERRSFETQLSRVEAELLRREA
PPSYGQLIAQGLIPPVEDFPVCSGNQASVLENLRLAVRSQLGFTSIRLPTTGRHGNIWRR
LFNFTRSRRSGSLALVSADTEEGADGSTSAREPERLGSRRGLLPLDSDDTDTESEQHPRR
DVPGAAGGLMAPLPQKTPPTTAVEAIVSVSASSAPLVSRESSISESISESSGVTGSSCTT
TATTTSSRSPFSSALSRVTRSLRWIRFSLGRSGDGGSSGIGQNHSPLRQLEQGSVGCTGV
GIRGEDEDDVELLIPVSDASSLDSDESSRPLLEQGLDQAFGPHLTPAAVSLRGRLVGRDG
PCEHCGIVHTARIPDACLEATAKTETSDDESLLLC
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggcttacacttcgagcttaaaccaggtttgtttgctgtggacacatctacttctcata
ttcatgggaaacacagtttcatcgcagcacagcgaaaacgtgtatgtatcaagcatgtca
aatgcctgtggagatgtagcggagcagataagggcgtccagtggagtgatcaccagccct
ggctggccctttgaatacccttctcacatcaactgcagctggaacatcagggccaaccct
ggagagatcatcaccatcagttttcaggactttgaaattcagagctcgcacagatgtggt
ttggactggatctccattggaacctacaagaacctggatgggtaccgggcctgtggctcg
actattcctgccccatacatctcctctcaggatcacgtgtggatcaagttccactctgat
gacagcacgactgcaaaaggcttcaggctctcttacataacagggaaatcggaagaagcc
agctgcaagcctgagcagttccactgcgctaatggaaagtgtatcccagagtcctggaag
tgtaacaccatggatgaatgtggcgataactcagacgaggagctgtgtgtacagcctaat
ccctcctcattcttctccttccagccttgcgccttcaaccagttcccttgtctctcacgc
tacacccgtgtttacacctgtctgccagagtcgctcaaatgcgacggcagcattgactgt
caggacttgggtgacgaaatcgactgtgacgtgccaacctgtggtgaatggctgcgcaac
ttctacggtactttcagctcgcccaactatcctgacttctatcctcctggcagtaactgc
acctggctgattgataccggcgaccaccgtaaggtcatcctgcgctttatggacttcaag
ctggacggcacaggctatggcgattatgttaaagtctacgatggactagaggagaacccc
aggcgtctgttgcgtgtgttgactgcgttcgactctcgagcccctgtagcagtggtgtca
tcttcaggccagcttcggatacacttttatgctgacaaaatcaatgcggctcgagggttt
aacgttacatatcaagtagagggtttctgcctgccgtgggaaatcccgtgcggagggaac
tggggttgctacactgaacaacaacgctgtgacggctactggcactgtcccaatggcagg
gacgagctcaactgcagcaactgccaggaagacgagttcccatgctcgcgaaacggtgcc
tgctacccacgctctgaccggtgcaactaccagaaccgctgcccgaacggctctgatgag
aagaactgctttttctgccaacctggaaacttccactgcaagaacaaccgctgcgttttt
gaaagctgggtgtgtgacgcgcaagacgactgcggggacggaagcgatgaggagagctgc
ccggtaatcgtgcccacacgagtcatcactgccgctgtaatcgggagtctgatctgcggc
ctgctgctggtcattgctctgggctgcacatgcaaactctactcactcaggatgtttgag
cgcaggtcctttgagactcagctctctagagtggaagccgagttactgagaagagaagct
cctccatcgtatgggcagctgattgctcaaggactgatccccccagtggaggattttcct
gtctgctctggaaaccaggcatctgttttagaaaacctgagactggcagttcgctctcag
ctgggattcacctcaatccggctccccaccacaggacgtcacggcaacatctggagacgc
ctgttcaatttcacacgttcacggcgctctggttccctcgcgctggtgtctgcggacaca
gaagagggtgctgatggcagcacctcagctcgtgagccggagaggcttggctctcgccgt
ggactcttgcccttggactccgacgatacggacactgagagtgagcagcatccccgcagg
gatgtcccaggagctgctggaggcctgatggcccctctgccacagaaaacaccccctaca
acagcagtggaagccatcgtctcggtgtctgccagctcggctccactcgtcagccgggag
agcagcatctctgagagcatctcggaaagttctggagtaactggatcctcatgtactact
actgctaccactacttcctcaagaagcccctttagcagcgctcttagccgggtcacccgc
agcctgcgatggattcgtttctctttagggcgctctggagatggagggtcaagtggcatt
gggcagaatcacagccctctgcggcaactggagcaaggaagtgtgggttgcactggggtt
ggcattagaggcgaggatgaggacgacgtggagctcctcattcccgtctcagatgcaagc
tccctggacagtgatgagagctccaggccgctgctggaacaaggcctggaccaggccttc
gggccccacctgacccccgctgcggtctctctcagaggccggctggtgggtagggatggc
ccctgtgaacactgtggaattgtccacacggcgcggatcccggacgcttgtctggaggcg
actgctaaaacagaaactagtgacgatgagtcactgctgctctgttaa
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