Carassius gibelio (silver crucian carp): 127979160
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Entry
127979160 CDS
T08819
Name
(RefSeq) serine/arginine-rich splicing factor 6-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03040
Spliceosome
cgib05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127979160
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127979160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgib03041
]
127979160
Spliceosome [BR:
cgib03041
]
Common components
Common spliceosomal components
SR proteins
127979160
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
127979160
NCBI-ProteinID:
XP_052440331
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All DBs
Position
B19:complement(12225425..12231755)
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AA seq
374 aa
AA seq
DB search
MSRVYVGKLSYRAREKDVERFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVCDLNGKDL
CGKRVIVEHTIGQRRDGGTRPGRSSRYGRGGGGGGGGGERFGPPTRTDYRLIVENLSSRC
SWQDLKDYMRQAGEVTYADTNKGRKNEGVIEFRQYSDMKRALEKLDGTEVNGRKIRLIED
RPGARRRRSYSRSASRSRSRSRRSRRSRSHSRTSSRSRVSGSRSRSRSTSKKTKGRSGRM
EESSNGARRGGESARDNSLSPSPPSKKGKRENKRARSYSRSRSRSRSRSRSKSVNDRDLS
RESGSKSQEANKGSDDGRATEKAHRSRAHSRSRSQTPPEADLQRKSRSRSKSKSRSHSRS
RSYSRSRSHSRSRS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgagtttacgtgggaaaattgagctatcgcgccagggagaaagatgtagaaagg
ttttttaaaggctatgggaagatcctggaagtagacctgaaaaacgggtatggttttgtg
gagttcgatgacccccgtgatgcagatgacgcggtgtgcgatctgaacggtaaagacctc
tgtgggaagcgagtgatcgtggagcacaccattggacagcggcgtgacggtggcaccaga
cctggaagaagtagtcggtacggtcgtggaggaggaggaggaggaggaggaggggaaagg
ttcggcccacccactcgcacagattacaggctgattgtggagaatctctccagtcgctgc
agctggcaggacctgaaggactacatgcgtcaggctggcgaggtgacttacgcagacact
aacaagggccgtaagaacgagggggtcatcgagttcaggcagtactcggacatgaagaga
gccctggagaaactggacggcaccgaggtcaatggaaggaagattcggctgatcgaagac
cggcctggggccagacgccgccgctcctactcccgcagcgcctcaaggtctcgctccagg
agcaggaggtcccgcaggagccgaagccacagccggaccagtagccgctcaagagtctca
ggctcgcgatcacgcagcaggtcaaccagcaagaagacgaagggcaggagcggtaggatg
gaggagagcagtaatggagctcgcaggggaggtgaaagcgccagggataatagcctgagc
cctagccccccaagcaaaaagggcaaacgggagaacaagagggctcgctcctattctaga
tcccgatccaggtcccgatctagatctcgatccaaatccgtgaacgacagggatttgtcc
agagagtctgggtccaaatctcaggaggcaaacaagggcagtgatgacggccgggcgact
gagaaggcgcaccgctctagagctcattctcgatccagatcacaaacccctccagaagct
gatctgcagaggaaatctagatccagatccaaatccaaatctcgctctcattcacgctcc
cgatcttattcccgatctcgatcccactcaaggtcacgttcttaa
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