Carassius gibelio (silver crucian carp): 127979205
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Entry
127979205 CDS
T08819
Name
(RefSeq) thyroid hormone receptor beta isoform X1
KO
K08362
thyroid hormone receptor beta
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04080
Neuroactive ligand-receptor interaction
cgib04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127979205
04081 Hormone signaling
127979205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127979205
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cgib03310
]
127979205
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
127979205
Nuclear receptors [BR:
cgib03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
127979205
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
CpXC
Motif
Other DBs
NCBI-GeneID:
127979205
NCBI-ProteinID:
XP_052440471
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Position
B19:9625207..9746447
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AA seq
415 aa
AA seq
DB search
MSEQADKCTSRWKDEAMQNGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTI
QKNLNPTYACKYEGKCVIDKVTRNQCQECRFKKCIAVGMATDLVLDDSKRLAKRKLIEEN
RERRRREELQKTVWERPEPTQEEWELIRVVTEAHMATNAQGNHWKQKRKFLVEEAMLLNE
ITCNLFCTSDQSAVGVKEAKPEDIGSAPIVNAPEGSKVDIEAFSQFTKIITPAITRVVDF
AKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGL
GVVSDAIFDLGVSLSSFNLDDSEVALLQAVILLSSDRPGLTSVERIERCQEEFLLAFEHY
INYRKHKVSHFWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcaagcagacaaatgcacctcccgctggaaagatgaggccatgcagaatggg
tacataccaagttacctggacaaggatgagctgtgtgttgtgtgcggggacaaagcgact
ggatatcattaccgctgcattacctgtgagggctgcaaaggtttttttcgacgcacaatt
cagaagaacttgaacccgacatatgcgtgcaagtacgagggaaagtgcgtcattgacaaa
gtcacgcgcaaccagtgccaagaatgtcgcttcaagaaatgcattgctgtcggcatggca
acagacttggtgttggatgacagcaagcgtctggccaagcggaagctgatcgaggagaac
cgcgagcggcggcggcgcgaggagctgcagaagacggtttgggagcgacccgagcccacg
caggaggagtgggagctgatccgggtcgtcactgaggcccatatggccacaaacgcccaa
ggcaaccactggaaacagaagcgcaagttcctggtcgaggaagcaatgctacttaatgaa
ataacatgtaatttattctgtacttctgaccagagtgcagtgggggtgaaggaagccaag
cctgaggacatcggttctgcacccatcgtcaacgcaccagaggggagcaaagtggacata
gaagccttcagtcagtttacaaaaattatcacccccgccatcactcgagtagtggatttt
gccaaaaagctgcccatgttctgtgagctgccttgtgaggaccagatcattttgctgaaa
ggctgctgtatggaaatcatgtctctgcgagcagcagtgcgatacgatcctgagagcgag
actctgacactgaacggggagatggctgtcacacggggccagctcaagaatgggggtctg
ggtgtggtctctgacgccatctttgatctgggtgtctcgctgtcctccttcaacctggat
gattcggaggtggcattgctacaagccgtgattttgctttcctctgatcgtccaggtttg
acgagcgtagaacgcatcgagcgctgtcaggaggagttcctcttggccttcgaacattac
atcaactaccgcaagcacaaggtgtctcacttctggcccaagctgctgatgaaggtgaca
gacctgcgcatgatcggtgcctgccatgccagccgcttcctgcacatgaaggtggagtgt
cccactgagctctttccgcccctcttcctggaagtgtttgaagactga
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