Carassius gibelio (silver crucian carp): 127979359
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Entry
127979359 CDS
T08819
Name
(RefSeq) syndetin-like isoform X1
KO
K23288
syndetin
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127979359
Membrane trafficking [BR:
cgib04131
]
Protein recycling
Others
EARP complex
127979359
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Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
127979359
NCBI-ProteinID:
XP_052440720
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Position
B19:22044308..22171737
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AA seq
991 aa
AA seq
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MQKIKSLMARQGLKSPQESVVDMSPVESFRTPSKEELRELREQPTDPQAEQEIIDRIEEV
YFSSDSFDMVQYELEQRLPPDLNLLELEEYRDKLKRQQAAVSKRVADLILEKQPSYVKEL
ERVTSLQTNLQLAAVICTNARRQLRSAKEGFTEASLGLLANQRRRQLLTGLLKSLRTIKT
LQRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYNCISELNSKLQDTLEQIEEQLDV
ALSKTCKHFDVSHYTKVQLAYKLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGN
ADTKFQKMQYKDLCTHITTDSYIPCLTDLCKALWEVMLSYHLTMLWHDEHYKEEEATPGA
DDSSAEGSDESTVDRNYVKKKLEHGLTRIWQDVQLKVKAYLLGTDVSNFKYDDFIVVLDV
ISRLMQVGEEFCGSKSEVLQESIKRQSVNYFKNYHRTRLEELRMFLENETWELCPVKYNF
SIAQLQEFNFMGQCRSPSVSPSRQLESTELVELSLFEQYLQGGNPFEMQIDNKEEETDDV
LASNGYESDELEKSVYQDYDSDSDVPEELKQDYVDEQTGDAPVKSVSRETLRSRKRSDYN
LNRANAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYLYAVYTFFGRND
MHFQSASLPSQGSQPGASRQVVPIYWYESSGLGLISSRLRTTLSRIQESLIDVEAGGENT
GPHASPEDRREKVPSPHLSQLVVLTASDTLYGLAERVVATESLVFLAEQFEFLHLHLDTM
MPSAKKPFLQQFYSQTVSTASELRKPIYWIVAAKAIDYEQMLLLMAGVKWDIKEIMSQHN
VYVDVLLKEFEKFNQRLGDVSKIVRIPLPVSNVLWEHCIRLANRTLVEGYANVKKCSNEG
RALMQLDFQQFLMKLEKLTDLRPIPDKEFVETYIKAYYLTENDMEQFIKNHREYSMKQLT
NLVNVCLGSHINKKARQKLLAAIDDIDRPKR
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaatcaagtcattgatggcccgtcagggtctgaagagtccccaggagagtgtg
gttgacatgagtcctgtggagagcttcaggacccccagcaaggaggagctgagggaactg
agagaacaacccactgatccacaggcagaacaagaaatcattgatagaatagaggaagtg
tacttttccagtgactcctttgacatggtgcaatacgagcttgagcagcgactccctccg
gatttgaaccttcttgagcttgaggagtacagagataagctgaagagacaacaagcagcc
gtatctaaaagagtggcagacctcattttggagaaacagccttcctatgttaaggagctc
gagagagtgacgtctctgcagaccaacttgcagctggccgcagtcatctgcactaatgca
cgaaggcagcttcgttctgctaaagaaggcttcactgaagccagtctggggctgttagcc
aatcagagacgacgacagctgttgacaggattgttgaagtctttgaggaccataaagact
ctgcaaagaactgatgttcgactgagtgaaatgctggaggaggaggactatccaggcgcc
atccagctgtgtttagaatgccagaaggctgccagcactttcaaacattacaactgtata
agcgagttgaattccaaactgcaagacactctggagcaaatcgaggaacagctagatgtg
gcgctgtccaaaacctgcaagcactttgatgtttctcactacaccaaagttcagctggca
tataaactgctgggcaagacacagacggccatggatcaactgcacatgcacttcacccag
gccatccacaacactgtcttccaggtggtgctgggatacgtagagttgtgcgccggaaac
gcagacaccaagttccagaagatgcagtacaaggacctttgcacgcacataaccacagac
agctacatcccctgcttgaccgacctctgcaaggccttgtgggaggtgatgctcagttac
catctaaccatgctgtggcacgatgagcactacaaagaagaagaggcgactcctggagcg
gatgattccagtgcagagggctcagacgaatctaccgtggaccgcaactatgtgaaaaag
aagcttgaacatggcttaacgcggatctggcaggatgtccaattgaaagtgaaagcctat
ttgctgggaacagacgtgtccaacttcaagtacgacgacttcattgtggttctggatgtt
atcagcaggttgatgcaggtgggagaggaattctgcggcagcaagtctgaggtgttgcaa
gagtccattaagagacagagtgtcaactactttaagaactatcacagaacccgcctggag
gagttgcgaatgtttcttgaaaatgaaacatgggagttgtgccctgtgaagtacaacttc
agtattgcccagcttcaggagttcaatttcatgggtcagtgtcgttctccttcagtatct
cccagcaggcagctggaatccactgagctggtggagctttctctgtttgagcagtacctg
cagggaggaaatccttttgagatgcagatcgacaataaggaagaggagaccgatgatgtc
ctggcttctaatgggtatgagtcagatgagctggagaagagtgtgtatcaggactacgac
agtgacagtgatgtacctgaggagctgaaacaagactatgtagatgaacagacaggagac
gctccagtgaagagcgtgtccagagagacacttcgcagccggaagaggtccgactacaac
ttgaaccgagccaatgcccccatccttaccaacaccaccctcaacgtgattcgcctggtt
ggaaaatacatgcagatgatgaacattctgaagcccatcgcctttgatgtcatccactgc
gtgtctcagctctttgattattacctgtatgccgtctacaccttctttggccgcaatgac
atgcacttccaatctgcatctctgccttcacaaggctctcaacctggtgcgtccagacag
gtggtccctatctattggtatgaatcatctgggctgggtttgatcagcagcagactgagg
acgacactgagccgaatccaggagagcctaattgatgtggaggctggaggggagaacaca
ggtcctcacgcgtctcctgaggacaggagggagaaggtccccagtcctcatctcagtcag
ctggtggtcctgacggctagtgatacgctttatggcttggctgagagagtcgtcgccact
gaatcactagtttttctggcagagcagtttgagttccttcatcttcatctcgacaccatg
atgccttcagccaagaagccctttcttcagcagttctactcacagaccgtatctacagcc
agcgagctccgcaaacccatttactggatcgtggcggccaaagccatagattacgaacag
atgctgttactgatggcgggagtgaaatgggacattaaagagataatgtcacagcacaac
gtctatgtggatgtccttttaaaggagtttgagaagtttaaccagagactgggagatgtg
tcgaaaatagttcggattcctttgcctgtgtccaatgtcttatgggagcactgcatccgt
ctggccaacaggacattagtggagggctatgcaaatgtgaagaaatgcagtaatgaagga
cgtgcgctgatgcagctggacttccagcagttcctgatgaagctggagaagctcaccgac
ctcagaccaattccagacaaggagttcgtagagacctacatcaaggcatactaccttact
gagaatgacatggagcagttcatcaagaaccacagggaatactctatgaagcagctgact
aacctggtcaatgtctgcctcgggtcccacatcaacaagaaagcacgacagaaactcctc
gcagctatcgatgacattgaccggccaaaaagataa
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