KEGG   Carassius gibelio (silver crucian carp): 127979442
Entry
127979442         CDS       T08819                                 
Name
(RefSeq) histone-binding protein RBBP4
  KO
K10752  histone-binding protein RBBP4
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03082  ATP-dependent chromatin remodeling
cgib03083  Polycomb repressive complex
cgib04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    127979442
   03083 Polycomb repressive complex
    127979442
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    127979442
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cgib03036]
    127979442
Chromosome and associated proteins [BR:cgib03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     127979442
  Histone modification proteins
   HAT complexes
    HATB complex
     127979442
   HDAC complexes
    Sin3A-HDAC complex
     127979442
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     127979442
    PRC2.2
     127979442
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     127979442
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    127979442
  Chromatin remodeling factors
   NuRD complex
    127979442
   NuRF complex
    127979442
   NuRF complex (fruit fly)
    127979442
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_DCAF12 ANAPC4_WD40 Beta-prop_RIG_1st WD40_MABP1-WDR62_1st eIF2A Beta-prop_IFT140_1st MIOS_WD40 Beta-prop_SPT8 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 127979442
NCBI-ProteinID: XP_052440874
LinkDB
Position
B19:complement(17348812..17353421)
AA seq 424 aa
MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
FSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEG
YGLSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGAADT
EVQG
NT seq 1275 nt   +upstreamnt  +downstreamnt
atggctgataaagaagctgcatttgatgacgcggtggaggagagggtgataaatgaagaa
tataaaatctggaagaaaaacaccccgtttctttatgatctggtgatgacccacgcgctg
gaatggcccagtcttactgctcagtggctgccagatgtcaccagacctgaagggaaggat
tttagcgtgcaccgcctggttctcggcactcatacctctgatgagcagaatcacctggtt
atcgccagtgtccagcttcccaatgatgacgcccagtttgatgcctcacattatgacagt
gaaaaaggagagtttggtggttttggctcagtgagtggcaagatagagattgagatcaag
attaatcatgagggagaagtgaacagggctcgctacatgccacagaacccctgcatcatt
gccaccaagacccccactagtgatgtgctggtctttgactacaccaaacacccctccaaa
cctgacccctctggagagtgcactcctgacctgcgactgaggggacatcagaaagaagga
tatggtctgtcctggaaccccaacctgagtggatgtctactgagtgcatctgatgatcac
accatttgtctgtgggacatcagcacagtgccaaaggagggaaaaatagtggacgctaag
accattttcactggtcacacggctgtagtggaggacgtgtcttggcacctgctgcatgag
tctctctttgggtctgttgcagatgaccagaagctgatgatctgggacacacgctccaat
aacacatccaaacccagtcatgcagtagatgcccacactgcagaggtcaactgtttgtcc
ttcaacccctacagcgagttcattctggccaccggttctgctgacaaaaccgttgcattg
tgggatctgcgaaacctgaagctgaaacttcactcatttgaatcgcacaaagatgaaatc
ttccaggttcagtggtcaccccataatgagaccatcctggcctctagtggaacagacagg
cgactcaatgtctgggacctcagtaaaattggtgaggaacagtcaccagaagatgcagag
gatggacctccagagctactgttcatccatggaggccatacagccaagatttctgacttc
tcctggaatccaaatgaaccgtgggtgatttgctctgtatctgaggacaacatcatgcaa
gtctggcagatggcagagaacatctacaatgatgaggacccagagggggcagcagacact
gaggttcagggataa

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