Carassius gibelio (silver crucian carp): 127979477
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Entry
127979477 CDS
T08819
Name
(RefSeq) iroquois-class homeodomain protein IRX-1b
KO
K24889
iroquois-class homeodomain protein IRX
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127979477
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
127979477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Dicty_REP
Motif
Other DBs
NCBI-GeneID:
127979477
NCBI-ProteinID:
XP_052440936
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All DBs
Position
B19:complement(15840774..15843744)
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AA seq
446 aa
AA seq
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MSFPQLGYPQFLNASQEMYGAERTAVMPCSPREGSSENSANPATAAAAITPMLGMYANPW
TVQNYSAFLPYNSAELALLSQMGSQYELKDNPGAHPPGFAVHAAPGFYPYGQYQYGDPSR
AKSATRETTSTLKAWLQEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK
VTWGRSAEDRDGRFFDSDNDDDAEKNDDEEEIDLETIDIDKPEEPRGDQNKESSDNQSER
EHVETARILSSPSALKNTDSPTSSSNKEQSVVKSVGEVSPGGPVCQRPGNSKPKIWSLAE
TATSPDNTQKLGVSSTPAGLRASPSSHPAFLSTNGIYTCQIGKLHNWASAAFLSANSLMG
VRSLLSQNNNFPNHSPVTNPGKKPSFASGSPCLDSDNSSDSFSPKHNDQENVQRIESPTL
ASRPPFPVIHDRSHHETSQRALKTIS
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcccccagttgggttacccacagtttctaaacgcctcccaagagatgtacgga
gcggagcgcacggcggtcatgccgtgctctccacgcgagggaagctcggagaacagcgca
aatcccgcgactgcagcggcggcgatcactccgatgctcggcatgtacgcgaatccgtgg
accgtgcaaaactacagcgccttcttaccttacaacagcgccgagctggccctgctctct
cagatggggtcgcagtatgagctgaaggataaccccggggcacatccaccaggatttgca
gtacacgctgcgcccggtttctacccatatggccagtaccagtacggtgacccgtcccgg
gccaagagcgctaccagagagaccaccagcacactgaaagcgtggctgcaggagcataaa
aagaacccgtatcccaccaagggtgagaagatcatgctggccatcatcacaaagatgacc
ctcacgcaggtgtccacctggttcgccaacgcgcgccggagactcaagaaggagaataaa
gtgacctggggtcgcagcgcggaggacagagacgggagattttttgacagtgacaatgac
gacgacgcggaaaaaaacgacgacgaggaagaaattgatctagagaccatcgatattgac
aagcctgaggagcccaggggagaccagaacaaggaaagctcggataatcagagcgagaga
gaacatgtagaaacagcgcggatattatcttcaccatcagcacttaaaaacacggacagc
cctacgtcgagtagtaataaagagcagagtgttgtcaaaagcgttggtgaggtgtctcct
ggtgggccggtgtgtcagaggcctgggaacagcaaacccaaaatctggtccttggcggag
acggcgacaagtccggataacacacagaagctcggtgtgtcctcgacgcccgcgggcctc
agggcctcaccctcgagccatcccgcgttcctctccactaacgggatttatacctgccag
attgggaaactacacaactgggcgagcgccgctttcctcagtgcaaattctttgatgggt
gtacgttcacttttgagtcaaaacaataacttcccaaaccacagccctgttacgaaccct
ggaaagaaaccgtcgtttgcctctgggtctccttgtctagacagcgacaactcatccgac
agtttcagtcctaaacataatgatcaagagaacgttcagagaattgaatctccaacactt
gcatccagaccaccgtttccggtcatccatgacaggtctcatcatgaaacatcacaacgc
gctctgaagactatttcatga
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