Carassius gibelio (silver crucian carp): 127979533
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Entry
127979533 CDS
T08819
Name
(RefSeq) endoribonuclease ZC3H12A-like
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127979533
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
127979533
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
127979533
NCBI-ProteinID:
XP_052441020
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All DBs
Position
B19:complement(29650538..29658708)
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AA seq
643 aa
AA seq
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MSAEISTIPTLQLYLDSFWSSSIGSHSSDINTTNAWVTAPKSSYSPPVSSSIIMDPAQSS
PTPDESSEPCSEFQAQLDLFLKLGFSQTQIRATFLKLGLNADTNRVLGELIQAAGESEER
EEPTASTVLVSRGDASNKVQSAQNHCHNVPAVSGAPEELVEDEDALRPIVIDGSNVAMSH
GNKEVFSCLGIQLAVNFFLERGHVDITVFVPSWRKEQPRPDVPITDQHILRELERRKLLV
FTPSRRVAGKRVVCYDDRFIVKLAYESDGIIVSNDTYRDLQGERPEWKRFIEGRLLMYSF
VNDKFMPPDDPLGRHGPTLDNFLRKTPRIPKKQPCPYGKKCTYGIKCKFHHPERTKQSQR
ALADELRDKAKISSTPHKPQPVSSQSPPLEEVMEQKLSLDAGSLKKSYASENVLVIKAAP
QPTQRKFPLKKERRHSPTSLDSFPRGSQERLDSGLGSYECHSPEASHCDRYCDHRKSKPS
NNGRHRYVPANSQPCSCCPYQPLSTGGVGQHHSMDLSSSTNPGYTQPRYHSYGGGPVYPP
VNMSQYSFPHNRGPPCQRGYWSDHYDGYPPASHNAMLPERGHGHWSPSNHNPQCSEREQV
RKKLLAIFNARLVDRAMDMFPYLLDPQRLAAEILTLQSQDGAF
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctgaaatcagcaccattcccacgttacaattgtatttggattccttttggtct
tccagcataggatcccacagttctgacataaacaccaccaacgcatgggtaacagcaccc
aaatcttcgtacagccctcctgtttccagcagcattataatggacccggcccagtccagc
ccgactccagacgaatcctcagaaccctgctctgaatttcaggctcagctcgacctgttc
ctcaagctgggattttcccaaacacagatccgtgccactttcctgaaacttggcctcaat
gcagacaccaacagggttttgggtgagcttatccaggctgctggggaatcagaggagaga
gaggaacctacagcctccacggtgctggtttcacgtggggatgcttccaataaagtccaa
agtgcccaaaatcactgtcacaatgttccagcagtgtcaggtgctccagaagagctggta
gaggatgaggacgcactcagacccattgtcattgatgggtctaatgtagccatgagtcac
gggaacaaggaagttttttcctgtctgggaattcagttggcggtgaacttcttcctggag
cggggtcatgttgacatcacagtgtttgtgccttcctggagaaaagaacagccgcgacct
gatgtgcctataacagatcagcacattctacgtgaattagagcggaggaagctcttggta
ttcacaccatccagaagggtggcaggaaaacgagtggtttgctatgatgaccgtttcatc
gtaaagctggcatacgaatccgacggcatcattgtttccaatgatacttaccgagatcta
caaggagaacgtcctgagtggaagcgttttatagaggggaggcttctgatgtattcgttc
gtcaatgacaagtttatgcctccagatgaccctttgggaagacatggacccaccttagac
aactttcttaggaaaactccacgtatacctaagaaacaaccctgtccttatggaaagaag
tgcacttatggaatcaagtgcaagttccatcatccggagcgaaccaagcaatcccagcgt
gccctggccgatgagctcagagacaaagccaaaatttcatccacaccgcacaaacctcag
ccagtgtccagtcagagtccacctctggaggaagtaatggaacagaaactctccctggat
gctggatctcttaagaagagttacgccagtgaaaatgtccttgtcattaaagcagccccc
cagccgactcaaaggaagtttcctttgaaaaaagagcgtcggcattcgccaacaagtcta
gattcctttcccaggggatctcaggagcgtttggattctggcttgggttcctacgaatgc
cattctcctgaagcatcccattgtgatcgctactgcgaccacaggaagtccaaaccatcc
aacaatgggcggcatcgttacgttccggccaatagccaaccctgcagttgctgtccttac
caacccctcagcactggtggagtcggtcagcaccatagcatggacctgtccagttcaaca
aacccgggttacactcaaccccgatatcactcctatggaggaggtccagtttacccacct
gttaacatgtcccagtattcatttccacacaacagagggcctccttgtcaacggggctac
tggtctgaccattatgatggctatcctccagcatcccataatgccatgctgccagagaga
ggacatggccactggtcaccctccaatcacaatcctcagtgctctgaacgggagcaggta
agaaagaaattactagcaattttcaatgcacgtttggtggacagagccatggacatgttc
ccatatctcctggacccacaaagactggccgcagagattttgacccttcagtctcaggat
ggggctttttag
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