Carassius gibelio (silver crucian carp): 127979602
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Entry
127979602 CDS
T08819
Symbol
zgc:91944
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127979602 (zgc:91944)
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
127979602 (zgc:91944)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
HlyD_D4
Motif
Other DBs
NCBI-GeneID:
127979602
NCBI-ProteinID:
XP_052441142
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All DBs
Position
B19:complement(18096962..18110923)
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AA seq
469 aa
AA seq
DB search
MRQWCLPAVAPRAEPLPTGRLSPQISDVRMECCDVEPRYTIEQIDLLQRLRLSGMTKPQI
IQALESLERLDPDHRTPCCNNHSAPPSAPTSAAPAAPSSSSSSSSSLTSATTQTPVMDAA
LSPSHSYDASPPPMYPPSGVQRSFSYDLAEEDWDLEEKVEEYMRRDSNLVKEEIKAFLNN
RRISQAIVGQVTGISQSYISQWLLQQGLEMSDSKRRAFYRWYLLERNSPGIRWSESQHAQ
VPRSRTDTPLNRQRELLMHLLPWYSAHQSQSGATLSMRSLVKEEPDWRLAGSPADRAAVG
PFRLRRGSRFTWRKECQSIMESFFIENQYPDEAKREEIANACNAVIQKPGCKLSEFERVT
ALKVYNWFANRRKEMKRRANIEAAILESHGIEVPSPSCHSNSEEVETQEFGDQVLSQRFS
EQEELSQRKDIEPEGAMLPPVEVVSPPSPSSQLMERKLNESKREATDDD
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgcgacagtggtgccttcctgctgtggctccacgcgcagaaccgctcccaacgggccga
ttatcacctcaaatctcagatgtcaggatggagtgctgtgatgtggagccacgctatacc
attgaacagattgacctgctccagcgtttaaggctgtcagggatgacgaaacctcagatc
attcaagcccttgagtctttagagaggctcgatccagaccatcggaccccatgctgcaac
aatcactcggccccacccagcgcccctacctctgcagcccctgctgctccctcgtcctcc
tcctcttcctcctcctctcttacttcagccaccacacaaacccctgttatggatgctgca
ttatcacctagccacagctatgatgcctcgccaccaccaatgtacccacccagtggagtt
cagaggtcgtttagttacgacttggcagaagaggactgggatctggaggagaaggtggag
gaatacatgaggagggacagcaaccttgtaaaagaagagataaaggcttttctcaataac
agaaggatctcgcaggcgattgtgggacaagtgacaggtatcagccagagctacatctct
cagtggcttctgcagcaggggctggagatgagcgactccaaacgcagggcgttctatcgc
tggtacctgctggagcgcaacagcccaggaatcagatggagtgaaagccagcatgctcag
gtccccaggagcaggactgacactcccttgaataggcagagagaactgctgatgcacctc
ctcccctggtactctgctcaccagtcccagtcaggtgccacgttgtccatgcgttcactg
gttaaagaggagcctgactggaggttggctggaagccctgcagacagggcagcagttggg
ccttttagactgcgcagaggtagtcgcttcacctggagaaaggagtgccagtcaatcatg
gaaagtttcttcattgagaatcagtatcctgatgaggccaaaagagaggaaattgccaat
gcttgtaatgctgtcattcaaaaacctggatgcaaactttcagaatttgaacgagtcact
gcactcaaagtgtacaactggtttgccaatcggaggaaggagatgaagagacgtgccaac
attgaggctgccatactggaaagccacgggatcgaggttcccagccccagctgccactcc
aacagcgaagaggtcgagactcaggagtttggagatcaagtcctgagtcagcggttctct
gagcaggaggagctctctcagagaaaagacattgagccagaaggtgccatgctacctcct
gtggaagtggtgtctcctccaagcccatcctctcaactcatggaaaggaaattgaatgaa
tcgaaaagggaggctactgatgacgattaa
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