Carassius gibelio (silver crucian carp): 127979706
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Entry
127979706 CDS
T08819
Name
(RefSeq) collagen alpha-2(VIII) chain-like
KO
K23455
collagen type VIII alpha
Organism
cgib
Carassius gibelio (silver crucian carp)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
127979706
NCBI-ProteinID:
XP_052441267
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Position
B19:complement(19469480..19521871)
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AA seq
686 aa
AA seq
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MLTVLCVLLTLGNHVLGGGYAPMPQMKYVQPMMKGPVGPPFREGKGQYLEFPPVMDVKGE
PGPQGKPGPRGPPGPPGLPGKPGIGKPGLNGQTGPSGPPGFPGIGKPGLPGLPGKIGPKG
PPGLNGEVGPRGEVGLRGLPGQPGPPGPAGLSLNGKPGLPGTRGPPGSRGDPGPKGGRGI
PGEQGPKGENGNGNTGPTGPRGPTGPQGPPGPPGVNGLGKPGIDGLPGQVGPKGDKGLPG
VQGFPGQAGPPGLQGQPGAAGVGKPGLDGVPGNPGPIGPKGDVGPRGTPGFPGPPGYGKP
GLLGQKGDRGPGGLQGAPGDKGEPGMDGLPGDTGPAGQPGLPGPQGPMGIPGKHGMPGLK
GENGPQGPPGLPGFRGDQGPSGLSGKPGLPGDKGLPGLNGATGKPGPKGEPGHIGLPGNP
GLIGGQGPKGENGLTGPPGPRGNSGIPGLPGPTGHMGPQGVPGIKGDQGPPGPQGFGKPG
DKGMSGPQGPPGKPGPPGHNGMQGPPGPPGPPGPPGPPNGDINHLAVQGPNIAGESIQKP
SGEKPSFGQAELSASVAPAFTAILTTPFPPSGMPIKFDRTLYNGQNAYNPATGIFTSPLP
GVYYFAYHVHVKGTSLWVALYKNNVPATYTYDEYKKGYMDQASGSAVLELKENDQVWVQM
PSDQANGLYSTEYIHSSFSGFLLCPT
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccgtgctctgtgtcctgctaacgctggggaatcatgttctggggggaggttac
gcccccatgcctcagatgaaatatgtgcagcccatgatgaaggggcctgttgggccaccc
ttcagagaaggcaagggccagtatcttgagtttccacctgtgatggacgttaaaggagag
ccaggtcctcaagggaagccaggaccaaggggaccacctgggcctcctggattaccaggg
aaaccaggtataggaaaacctggtctcaatggtcagacaggtccttcagggcctccagga
tttcctgggattggaaaaccaggactaccagggttaccaggaaaaataggacctaaagga
cctcctggactaaatggtgaggttggacctcgtggagaagtgggtctacgtggacttcca
ggtcagccaggaccacctggaccagcaggtctatcgttgaatggcaaaccagggttacct
gggactagaggcccaccagggtcaagaggtgacccgggacctaaaggtggacgtggtatt
cctggtgaacaaggacctaaaggtgaaaatggcaatggaaatacaggtccaacaggtccc
aggggacccactggccctcaaggacctccaggtcctccaggtgttaatgggttgggtaaa
ccagggattgatgggctgcctggacaagtagggccaaaaggagataaaggacttccagga
gttcaaggtttcccagggcaagctggtcctcctggactacaaggtcagccgggggcagct
ggtgtgggaaaacctggacttgatggtgttccaggtaacccaggcccaataggtccaaag
ggtgatgttggccccagaggaactcctgggtttcctggccccccaggctatgggaaacca
ggacttttaggacagaaaggagatagaggtcctggtggattacaaggagcccctggtgac
aaaggagaacctgggatggatggtctaccaggagatacagggccagctggacagccaggg
cttccaggtccacaaggtcctatgggtattccaggaaaacatgggatgcctggtctaaaa
ggagagaatggcccacaaggacctccgggcttgccagggtttagaggagatcagggtccc
agtgggctctcaggaaagcctggcctgccaggggataaaggccttcctggtctcaatgga
gccacaggcaaacctggacctaaaggtgaaccgggtcacattggactgccaggtaatcct
ggtttgatcgggggacaaggtccaaagggtgaaaatgggttaacaggaccccctgggcca
cgtggcaattcaggaatccctggactcccaggtcctactggtcatatgggacctcagggt
gttccagggataaaaggcgatcaaggtccaccagggccccaaggatttggaaagcctgga
gataaaggtatgtccggtccacaaggacctccaggaaaacctggccctcctggacataat
ggtatgcagggccctccaggtccacctggacctcctgggcctcctggccctccaaatggt
gatataaatcacttagcagttcaaggaccaaatattgcaggagaatccattcaaaagcca
agtggtgagaaaccttcttttggtcaggctgagctctctgcctctgtggctcctgctttt
actgccattttgacgacaccatttccaccatctggaatgccgatcaaatttgacagaact
ctatataatgggcaaaatgcttacaaccctgccacgggcatcttcacaagcccactgcct
ggagtctactattttgcgtatcacgtacatgtaaagggaaccagcctgtgggtggcactg
tacaaaaacaatgtgccagccacatacacctatgatgaatacaagaagggctatatggac
caggcatcaggtagtgcggttctggagctgaaagagaatgaccaggtttgggtgcaaatg
ccctctgaccaagcaaacgggctctactccactgaatacatccattcgtccttctcaggg
ttcctcctgtgccccacataa
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