Carassius gibelio (silver crucian carp): 127979733
Help
Entry
127979733 CDS
T08819
Name
(RefSeq) antigen peptide transporter 2-like
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib02010
ABC transporters
cgib04145
Phagosome
cgib05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
127979733
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127979733
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127979733
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cgib02000
]
127979733
Enzymes [BR:
cgib01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
127979733
Transporters [BR:
cgib02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
127979733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
MFS_1
AAA_22
AAA_30
RsgA_GTPase
AAA_15
AAA_29
Motif
Other DBs
NCBI-GeneID:
127979733
NCBI-ProteinID:
XP_052441310
LinkDB
All DBs
Position
B19:33495043..33499227
Genome browser
AA seq
725 aa
AA seq
DB search
MRKVLVFACVLCVDIIIVYTLDLGGTLLKSRTGNLDYNLFLQWAESALRCALLSAGSVLY
KDASDPLIRRWITVHCFIGSVYETGRLALFDNSRLDKFNSWLVGTVAATLACLFWEITLP
DTNGESNGKERKQKARVLFIRVIRLSKPDYLLLCGAFVFLSLAVLCEMFIPLYTGKVIDI
LGSHYQWDNFRSAIILMGLFSLGSSFSAGCRGGLFMCAINSVTCRVKVQLFGSLVRQDIG
FFETTKTGDITSRLSTDTTLMGRAVALNVNVLLRTMIKTLGMLYLMLSLSWKLTLLMLME
TPLTGLLQNIHDTHYQRLSKEVQDSIAQANDAAGEAVSGIRTVKSFRTELGETHRYNVRL
METHNLKTRRDTVRAIYLLVRRMTEVGMKVAMLYYGRLFIQYGQMTTGNLVSFILYQQDL
GDNIRTLIYIFGDILNSVGAAGKVFEYMDREPEVSIDGDLQPSDLKGHISFQNLTFSYPR
RPDHNVLKNFSVELKPGQMTALVGMSGGGKSTCVSLLERFYQHQQGQILLDGQPLQNYQH
KYLHSKIAMVGQEPVLFSGTVRDNIAYGLPGCSMERVKEAASKANAHAFISNMENGYETD
VGERGNLLSGGEKQRIAIARALIRQPQVLILDEVTSSLDTESEQMVQQALACCPTQTLLV
IAHRLKTIERADQIVVIDSGEVVELGTHQELMDKKGNYYKLRERLFTDDNTANQDNEKSD
TIKAQ
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaagttttggtgttcgcgtgtgtattatgtgtagacataataatagtttatact
ctggacctcggaggaaccttgctgaagtctcgtacaggaaacctcgactataatctgttt
ctccagtgggctgaatctgcattgagatgcgcgctgctgtccgcaggatcagttttatat
aaagatgcgtctgatccactgatacggagatggattacggtccactgttttattggttcg
gtatacgaaaccgggcgcttagcgctgtttgacaactctcgccttgacaagtttaattcg
tggcttgtcggtaccgtggctgctactttagcttgtctgttttgggagataacgctgcct
gacacgaatggagagagtaacggtaaagagcgcaaacagaaggctcgagtcctcttcatc
cgggtcatccgtttgtccaaaccagactacttattattgtgtggagcttttgtctttctg
tccttggctgtgctatgtgagatgttcatcccactgtacactggaaaggtgattgacatc
ttgggttcacattatcagtgggataacttcagatcagctatcattctcatgggattattc
tctctgggaagttctttcagtgctggatgtcgtggaggtctgttcatgtgtgcaatcaat
agcgtcacctgcagagtcaaggtgcaactgtttgggtcccttgtcaggcaggacattggc
ttctttgagaccaccaagacaggtgatatcacatctaggctgtccacagacactactcta
atgggtcgggctgtagccctgaatgtcaatgtccttctgcgaaccatgattaagaccctg
ggcatgttgtatctgatgctgagcctctcgtggaagcttacacttctgatgctgatggag
acgccgctaacaggcttactgcaaaacatacatgacacacattatcagaggctctcaaaa
gaagtccaggactccattgcacaagccaatgacgcggctggagaggcagtgtcaggaatc
aggacagtaaagagtttcaggacagaacttggcgaaacccatcgatataatgtccgcttg
atggaaacccataatctgaagactcgacgggacacagtcagggcgatttacctgttggtt
aggcggatgacagaagtgggaatgaaggtggccatgctttactatgggagactctttatc
cagtatggacagatgaccacagggaatctcgtctctttcattctctatcagcaagacctc
ggagacaacataaggactttgatctatatcttcggagacatactgaactcagtaggtgca
gctggaaaggtgttcgagtacatggaccgagagcctgaagtcagtattgatggagacctg
cagcccagtgatctgaaaggacacatcagctttcagaacctcactttctcgtatcccaga
agacccgaccacaatgtattaaagaacttctctgtggagttgaagccgggtcagatgacg
gctctggtgggaatgtcaggaggagggaagagcacctgtgtgagtctcctggagagattt
taccagcatcagcagggacagattctgttagacggacaaccactgcagaactaccaacac
aaatacttgcacagcaagatagcgatggtgggtcaggagcctgtacttttctccggcact
gtacgagacaacatcgcctatggtctgcccggctgctcaatggagagagtaaaggaggct
gccagcaaagccaatgcccatgccttcatctcaaacatggaaaatggctacgaaacagat
gtgggagagcgtggtaatctgctctcgggaggtgagaagcagcgcatcgctatcgccaga
gcactgatcagacaacctcaggtgctcattctggatgaagtcaccagctctttagacact
gaaagtgaacaaatggttcaacaggccctggcctgctgccccactcagaccttgcttgtg
atcgctcataggctgaagaccatcgagagggcggatcagatcgtggtgattgacagcggt
gaggtggtggagctggggacacatcaggaactgatggacaagaaaggaaattactataaa
ctgagagagaggctctttactgatgataacacagcaaaccaagacaatgagaaatctgac
actataaaagctcaatag
DBGET
integrated database retrieval system
