Carassius gibelio (silver crucian carp): 127979768
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Entry
127979768 CDS
T08819
Name
(RefSeq) POU domain, class 2, transcription factor 2 isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127979768
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127979768
03021 Transcription machinery [BR:
cgib03021
]
127979768
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
127979768
Transcription machinery [BR:
cgib03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
127979768
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
Motif
Other DBs
NCBI-GeneID:
127979768
NCBI-ProteinID:
XP_052441349
LinkDB
All DBs
Position
B19:complement(31938716..31986772)
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AA seq
698 aa
AA seq
DB search
MFVPLPVPLVFQRTAPDFGAWRLKSPLPLRSGNSVDIRMSKAIEDKMGTELPVDSTDSER
NSPEASDQTQPMKTSPFCLSPAPSNTKVKAEETAEMTSVHAPPAQPALPHTQLMLAGSQL
AGLAALLPAQQQLLLQQAQAQLLAAAVQQSNAAHAAHAAAAANQQQQTQQQQANQAAAQA
QSQTKPEQAPPPLLSQPIQLTAQAFCLSLQDIQQFLQLQQLVLMPGHPLQSPAQFLLPQA
QTQQGQQGLLSTSNLIPLPQQSPGSLLTSPPRLGLQAQHHLDDRLWSLQREKSVESIISS
APSSAPPMSSVSTVTPHAEEPSDLEELEQFARTFKQRRIKLGFTQGDVGMAMGKLYGNDF
SQTTISRFEALNLSFKNMCKLKPLLEKWLSDAETMAIDNMLPSPSSLSSPLLGFEGLPGR
RRKKRTSIETNVRIALERNFISNQKPTSEEILLMAGQLNMEKEVIRVWFCNRRQKEKRIN
PSSATPPLPNHPPAQTHKPPCYSPHMMSSQGLAQAATSLSTTAVSPTPSVACPLNPSGHA
AMSSAPSSMTPPPLSTVSPTPRSLSSPGLNTGNTMMGVSTGMNQAFISSNPLATMQALAA
SGGQMPISALEGSGQMFLGGAGGPGAGLRQSLFLNRPTLLPLARSAGMGLLGTPRASPPP
GASGTSPDSCSISPCSSPASFCSLGDASPPPLGGAMAE
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttcccttgccggtgccgttggtgtttcagagaaccgctcctgatttcggcgcc
tggcgactcaagtctccgctgcctctgcgctccgggaactccgtagatatcaggatgtct
aaagccatcgaggacaagatggggactgagcttccagtggacagtacagactctgagagg
aacagtccagaagccagcgatcagacccagccgatgaaaacaagtcctttctgcctgtct
cctgcacccagcaacacaaaggtgaaagccgaggagactgctgagatgaccagtgttcac
gctcctccagctcagccggctctgccacacacacaactcatgctggccggcagtcagctc
gcagggctggccgctctcctccctgcgcagcagcagctgttgttgcagcaggctcaagcg
cagctgttagccgcagccgtgcagcagtcgaacgccgcgcatgccgcccacgcagccgcg
gcagccaatcagcagcagcagacgcagcagcagcaggccaatcaggcagcagcacaagcc
cagtctcaaaccaaacctgagcaagctccgcctccacttctgtcacagcctatccagctc
actgcccaggctttctgtctgtctctgcaggacattcagcagtttctgcagttacagcag
ctggtcctgatgcccgggcatcctctacagtctcctgctcagttcctgcttcctcaagcc
cagactcagcaggggcagcaaggtttgctttcaacatcgaatttgattccactacctcag
cagagcccagggagtctcctgacctccccacctagactgggccttcaagcacagcatcat
cttgacgacaggctgtggtcattgcagagggagaagagcgtggagagcatcataagctcc
gccccctcctcagccccgcccatgagctctgtttccacggtgacacctcacgccgaggag
cccagcgatctggaggagctcgaacagttcgccagaaccttcaaacagaggagaattaaa
ctaggcttcacacagggggacgtgggtatggccatgggtaaactctacggcaatgacttc
agtcagaccaccatctcacgcttcgaggctctcaacctcagctttaagaacatgtgcaag
ctcaaacccttgctggagaagtggctgagcgatgcagaaacaatggcgatagacaacatg
ctgccgagccccagttctctgtcctcacctctgctgggcttcgaaggcttgcctggacgc
cgccgaaagaaacgcaccagcatcgagaccaacgtccgcatagccctggagcgcaacttc
atctcgaaccagaagcctacctctgaagaaatcctgctgatggccgggcagctcaacatg
gagaaagaggtcatccgagtctggttctgcaaccggcggcagaaagagaagcgcataaac
cccagcagcgccacccctcctctgcccaatcatcctccggcgcagacgcacaaaccgccc
tgctacagcccgcacatgatgtccagtcagggactggctcaagccgctaccagtctcagc
acaacagccgtcagtcccacaccttctgtggcctgccctcttaaccccagtggacatgca
gcaatgagctccgccccttcctccatgactccgccccctctcagcactgtcagcccgact
ccgcgcagtctcagcagccctggcctcaacacagggaacacaatgatgggcgtaagcaca
ggaatgaaccaggccttcatcagcagcaaccctctggccacaatgcaagccctagctgcc
agtggtggccagatgcccatttccgctcttgagggcagcggccaaatgttcctgggtgga
gctggaggtccaggagctggacttcgccagtccctcttcctaaaccgccccactttactg
cccctggccaggagtgcaggcatgggtctgctgggcacccccagggcttctccgcctcct
ggagccagcggcacaagcccagactcctgctccatctccccctgctcaagccccgcctcc
ttctgctcattaggcgacgcctcaccgccccctctgggcggagccatggctgagtga
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integrated database retrieval system
