Carassius gibelio (silver crucian carp): 127979854
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Entry
127979854 CDS
T08819
Name
(RefSeq) low-density lipoprotein receptor-related protein 6-like
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04150
mTOR signaling pathway
cgib04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
127979854
04150 mTOR signaling pathway
127979854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127979854
Membrane trafficking [BR:
cgib04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
127979854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
Vgb_lyase
DUF5050
SGL
EGF_LRP2
EGF
Insulin_TMD
DUF2605
Motif
Other DBs
NCBI-GeneID:
127979854
NCBI-ProteinID:
XP_052441361
LinkDB
All DBs
Position
A4:35892521..35915119
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AA seq
1614 aa
AA seq
DB search
MGAVLQSLLLCTLCLQIRGLPLLLYANRRDLRLVDAARGRGNASVLVSGLEDAAAVDYVY
EQGLIYWSDVSEEAIKRTLFNGSAPSGLQNTVVSGLASPDGLACDWMGNKLYWTDSETNR
IEVAELDGTNRKVLFWQDLDQPRAIALDPNRGYMFWTDWGEIPKIERAGMDGTHRSVIID
SEIYWPNGLTLDYELKKLYWADAKFSFIHRSELDGSHREVVVKGSLPHPFALTLYEDTLF
WTDWNTHSIHACLKHTGENSHEIHTNIFSPMDLHVYSQERQPLDVTSPCALKNGGCSHLC
LLSPVKPYYQCACPTGVQLLDDNQTCRDGASQLLLLARRTDLRRISLDTPDFTDIVLQTD
DIRHAIAIDYDPVEGHIYWTDDEVQAIRRSFLDGSEAQFLVTSQVSHPDGIAVDWIARNL
YWTDTGTDRIEVTRLNGSMRKILISEDLDEPRALALDPVSGFMYWTDWGEVPKIERAALD
GTERLVLVNTSLGWPNGLALDYSQRKIYWGDAKTDVIEVMEMDGSGRRVLVDDNLPHIFG
FTLLGDYIYWTDWQRRSIERVHKLSLEREVIVDQLPDLMGIKATHVHQTFGVNPCAHANG
GCSHLCLYKPQGVSCACPIGLELMADLSTCIVPEAFLLFSRHTDIRRISLETNNNNVAIP
LTGVKEASALDFDITDNRIYWTDITLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGK
NLYWADTGTNRIEVAKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGRPKIDRSA
MDGSGRITLVPNVGRANGLTIDYAERRLYWTDLDTTLIESSNMMGLEREVIADDLPHPFG
LTQYQDYIYWTDWSQRSIERANKTSGQNRTVIQGHLDYVMDILVFHSSRQSGWNACASTN
GHCSHLCLAVPVSSFRCGCPAHYSLNQDNKTCSAPTSFLLFSQKTAINRMVMDELQSPDI
MLPIHSLRNVRSIDYDPLERQLYWIDSKQNAIRRAQQDGNQSVTVVSGASLGLQPFDLSI
DVYSRFIYWTSELTNVINVTRTDGSRVGVVLRGEHDRPRAIMVNPERGYMYFTNLQERSP
KIERAALDGTEREVLFFSNLGKPVALAVDNELGKLFWADMDLRRIESSDLSGANRIVIED
SNILQPVGLTVFGNFLYWIDRQQQMIERIHKITREGRTKIQARIASLSDIHAVRQLHMDE
YNKHPCTSENGGCSHICIVKGDGSTRCSCPVHLVLLQDELSCGEPPTCSPEQFSCVSGEV
DCIPQAWRCDGFSECDDGSDERDCPVCSEHQFQCDSKQCVDVTLRCNGEIDCQDRSDENQ
CEVLCPVDQFTCTDGQCIGRHKKCDHNTDCTDNSDEIGCYATEEPSFSPSNTIGSIVGVV
MVLFVVGAVYFVCQRVLCPQMKDDGETMTNDFVVHGPAPVPLGYVPHPGSLTGSLPGMSR
GKSVIGSLSIMGGSSGPPYDRAHVTGASSSSSSSTKGTFFPPILNPPPSPATVRSQYTME
FGYSSNSPSTHRSYSYRPYSYRHFAPPTTPCSTDVCDSDYTPGRRAPHTSSAAVKGYTSD
LNYDSEPLPPPPTPRSQYLSAEENCESCPPSPFTERSYSHHLYPPPPSPCTDSS
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atgggtgccgtactacagagtctcttactgtgcactttgtgtttgcagattcggggcctg
ccgctgctcttgtatgcgaatcgaagggacttgcgtctggtggacgcggctcggggtcga
gggaacgcctcggtgctggtcagcggtctggaggacgcggcggctgtggattatgtttac
gagcagggactgatttactggagcgacgtgagcgaggaggccatcaaacgcacgctgttt
aacgggtcagcgcccagcgggctccagaacacggtcgtgtccggtctggcctctccggac
ggcctggcctgtgactggatggggaacaagctctactggaccgactcggagaccaaccgg
atcgaagtagcggagctggacgggacaaacaggaaggtgttgttctggcaggatctggac
cagccgagggccatcgctctggaccccaaccgagggtacatgttttggacggattggggt
gagatcccgaagatcgagcgcgctgggatggacgggacgcatcgctcggtcatcatcgac
tcggagatctactggcccaacggcctgacgctggactacgagctgaagaaactctactgg
gccgacgccaagttcagcttcatccaccgctccgagctggacggatcacacagggaggtg
gtggtgaagggctcgctgccgcacccgttcgcactgacgctgtacgaggacacactcttc
tggacggactggaacacacactccatccacgcctgcctcaaacacaccggagagaacagc
cacgagatacacaccaacatcttctcacccatggatctacacgtctacagccaggagcgc
cagccgctggacgtgacgagtccctgtgcgctgaagaatggaggatgttctcatctgtgt
ctgctgtctccggtcaaaccttattaccagtgcgcctgtccaaccggcgtccagctgctg
gacgacaaccagacctgcagagacggtgcctctcagctgctgctgctggcgcggcgcaca
gacctgcggcggatctctctggacacaccggacttcaccgacatcgtgctgcagaccgac
gacatccgacacgccatcgccatcgactacgacccggtggagggtcacatctactggacg
gacgacgaggtgcaggccatccgcaggtccttcctggacggcagcgaggctcagttcctg
gtgacctcacaggtcagtcatccggacgggatcgccgtggactggatcgcacggaacctg
tactggacggacaccggcacggaccgcatcgaggtgacccgtctgaacggctccatgagg
aagatcctgatctcggaggatctggacgagcccagggccctcgcgctggaccccgtctcc
gggttcatgtactggacagactggggtgaagtgccgaagatcgagcgggcggctctggac
gggacggagcgtctggtgctggtcaacacgtctctgggatggcccaacggtctggcgctg
gactacagccagaggaagatctactggggagacgccaagaccgacgtcatcgaggtgatg
gagatggacggatcgggtcggagggtgttggtggatgataacctgccgcacatcttcggc
ttcacgctgctgggcgactacatctactggacggactggcagcggcgcagcatcgagcgc
gtgcacaaactcagcctggagcgcgaggtgatcgtcgaccagctgcctgacctcatgggg
atcaaggccacacacgtccaccagacctttggtgtgaacccgtgtgcgcacgctaacggc
ggctgcagtcacctgtgtctctataagccgcagggcgtgtcgtgtgcgtgtcccatcggt
ctggagctcatggccgatctgagcacctgcatcgtccccgaggccttcctgctgttctcc
cgacacacggacatcaggcgcatctcgctggagaccaacaacaacaacgtagccattcct
ctcaccggcgtcaaagaagcgtccgcactcgacttcgacatcaccgacaaccgcatctac
tggaccgatattacactgaagaccatcagtcgtgcgttcatgaacggcagcgctctggag
cacgtggtggagttcggtctggactatcccgagggaatggctgtggactggctgggaaag
aacctgtactgggccgacaccgggaccaaccgcatcgaggtggccaaactggacgggcag
cacagacaggttctggtgtggaaggatctggacagccctcgagcactggcactggaccca
gccgagggcttcatgtactggacggagtggggtggacggccgaagattgaccgctcggcc
atggacggatctggacgcatcactctggtgccgaacgtgggtcgagcgaacggactgacc
atcgattacgccgagcgccggctgtactggacagacctggacaccacgctgatcgagtcc
tccaacatgatgggtctggagcgtgaggtcatcgctgacgatctgccgcacccgttcgga
ctcacacagtaccaggactacatctactggacggactggagccagcgcagcatcgaacga
gccaacaagaccagcggacagaaccgcaccgtcatacagggacacctggactacgtcatg
gacatcctggtgttccactcgtccagacagagcggctggaacgcctgcgcctccaccaac
ggacactgctcacacctgtgtctcgctgttcctgtcagcagcttcaggtgcggctgccct
gcacactactccctcaaccaggacaacaagacctgcagcgcgcccacatccttcctgctg
ttcagtcagaagacggccatcaatcgtatggtcatggacgagctgcagagtcctgacatc
atgctgcccatccacagcctgagaaacgtgcgctccatcgactacgacccgctcgagcgc
cagctgtactggatcgactccaagcagaacgccatccgccgcgcgcagcaggacgggaac
cagagcgtgacggtggtgtccggcgcgagcctcggcctgcagcccttcgacctcagcatc
gacgtctacagccgcttcatctactggaccagcgaactgaccaacgtcatcaacgtgacg
cgcacagacggctcccgggtcggagtggtgctgcgcggggaacacgaccgaccgcgcgcc
atcatggtcaatcctgagcgagggtacatgtacttcactaatctgcaggagcgctccccg
aagatcgagcgcgccgctctggacgggacggagcgcgaggtgctgttcttcagtaatctg
gggaagccggtcgctctggccgtcgacaacgagctgggaaaactcttctgggccgacatg
gacctgaggcgcatcgagagcagcgacctgtccggagccaatcggatcgtgatcgaggac
tccaacatcctgcagccggtgggtctgacggtgttcgggaacttcctgtactggatcgac
cggcagcagcagatgatcgagcgcatccataagatcacacgtgagggacgcaccaagatc
caggcgcgcatcgcctctctgagcgacatccacgccgtccgccagctccacatggacgag
tacaataaacacccctgcacctctgagaacggcggctgctcacacatctgcatcgtgaag
ggagacggatcgacgcgctgctcctgtcccgttcacctggtgctgctgcaggacgagctc
tcctgcggagagccgcccacgtgttctccggagcagttctcgtgtgtgtccggcgaggtg
gactgcatccctcaggcctggcgctgcgacggcttctctgagtgtgacgacggcagtgac
gagcgagactgtcccgtctgctccgaacaccagttccagtgcgacagcaagcagtgtgtg
gacgttactctgcgctgcaacggagagatcgactgccaggaccgatccgacgagaaccag
tgtgaagtgctctgtcccgtggatcagttcacctgcaccgacggccagtgcatcgggcgg
cacaagaagtgtgaccacaacacggactgcacggacaactctgacgagatcggctgctac
gccacagaagagccatccttctctccctcgaacaccatcggctctatcgtgggggtggtg
atggtgctgttcgtggtgggggccgtgtatttcgtgtgccagcgtgtcctgtgtcctcag
atgaaggacgacggcgagaccatgaccaatgacttcgtggtgcacgggccggcgccggtg
cctctgggatacgtgcctcaccccggctctctgaccggctcgctgccaggcatgtctcgt
gggaagtcggtcatcggctcgctgagcatcatgggaggcagcagcggtcctccgtatgac
cgagcacatgtgaccggagcctcgtccagcagctcgtccagcaccaagggcacattcttc
cctccgatcctgaatccccccccgtctcccgccacagtgaggtcacagtacacgatggag
ttcggttactcctcgaacagtccgtcgacgcaccgatcgtacagctacagaccgtacagt
taccgtcacttcgcccccccgacgacgccctgcagcacagacgtgtgtgacagcgactac
accccgggacgaagagctccgcacacgtccagcgccgcggtcaagggctacacgagtgac
ctgaactacgactcggagccgctgccgccgccgcccacccctcggagccagtacctgtct
gcagaggagaactgtgagagctgcccaccctcgcccttcacagagcgcagctactcacac
cacctgtacccacctccaccctcgccctgcacagactcgtcctga
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integrated database retrieval system
