Carassius gibelio (silver crucian carp): 127979854
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Entry
127979854 CDS
T08819
Name
(RefSeq) low-density lipoprotein receptor-related protein 6-like
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04150
mTOR signaling pathway
cgib04310
Wnt signaling pathway
cgib04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
127979854
04150 mTOR signaling pathway
127979854
09133 Signaling molecules and interaction
04519 Cadherin signaling
127979854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127979854
Membrane trafficking [BR:
cgib04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
127979854
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
LRP1-like_beta_prop
Vgb_lyase
SGL
EGF_LRP2
EGF
Insulin_TMD
DUF2605
Motif
Other DBs
NCBI-GeneID:
127979854
NCBI-ProteinID:
XP_052441361
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All DBs
Position
A4:35892521..35915119
Genome browser
AA seq
1614 aa
AA seq
DB search
MGAVLQSLLLCTLCLQIRGLPLLLYANRRDLRLVDAARGRGNASVLVSGLEDAAAVDYVY
EQGLIYWSDVSEEAIKRTLFNGSAPSGLQNTVVSGLASPDGLACDWMGNKLYWTDSETNR
IEVAELDGTNRKVLFWQDLDQPRAIALDPNRGYMFWTDWGEIPKIERAGMDGTHRSVIID
SEIYWPNGLTLDYELKKLYWADAKFSFIHRSELDGSHREVVVKGSLPHPFALTLYEDTLF
WTDWNTHSIHACLKHTGENSHEIHTNIFSPMDLHVYSQERQPLDVTSPCALKNGGCSHLC
LLSPVKPYYQCACPTGVQLLDDNQTCRDGASQLLLLARRTDLRRISLDTPDFTDIVLQTD
DIRHAIAIDYDPVEGHIYWTDDEVQAIRRSFLDGSEAQFLVTSQVSHPDGIAVDWIARNL
YWTDTGTDRIEVTRLNGSMRKILISEDLDEPRALALDPVSGFMYWTDWGEVPKIERAALD
GTERLVLVNTSLGWPNGLALDYSQRKIYWGDAKTDVIEVMEMDGSGRRVLVDDNLPHIFG
FTLLGDYIYWTDWQRRSIERVHKLSLEREVIVDQLPDLMGIKATHVHQTFGVNPCAHANG
GCSHLCLYKPQGVSCACPIGLELMADLSTCIVPEAFLLFSRHTDIRRISLETNNNNVAIP
LTGVKEASALDFDITDNRIYWTDITLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGK
NLYWADTGTNRIEVAKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGRPKIDRSA
MDGSGRITLVPNVGRANGLTIDYAERRLYWTDLDTTLIESSNMMGLEREVIADDLPHPFG
LTQYQDYIYWTDWSQRSIERANKTSGQNRTVIQGHLDYVMDILVFHSSRQSGWNACASTN
GHCSHLCLAVPVSSFRCGCPAHYSLNQDNKTCSAPTSFLLFSQKTAINRMVMDELQSPDI
MLPIHSLRNVRSIDYDPLERQLYWIDSKQNAIRRAQQDGNQSVTVVSGASLGLQPFDLSI
DVYSRFIYWTSELTNVINVTRTDGSRVGVVLRGEHDRPRAIMVNPERGYMYFTNLQERSP
KIERAALDGTEREVLFFSNLGKPVALAVDNELGKLFWADMDLRRIESSDLSGANRIVIED
SNILQPVGLTVFGNFLYWIDRQQQMIERIHKITREGRTKIQARIASLSDIHAVRQLHMDE
YNKHPCTSENGGCSHICIVKGDGSTRCSCPVHLVLLQDELSCGEPPTCSPEQFSCVSGEV
DCIPQAWRCDGFSECDDGSDERDCPVCSEHQFQCDSKQCVDVTLRCNGEIDCQDRSDENQ
CEVLCPVDQFTCTDGQCIGRHKKCDHNTDCTDNSDEIGCYATEEPSFSPSNTIGSIVGVV
MVLFVVGAVYFVCQRVLCPQMKDDGETMTNDFVVHGPAPVPLGYVPHPGSLTGSLPGMSR
GKSVIGSLSIMGGSSGPPYDRAHVTGASSSSSSSTKGTFFPPILNPPPSPATVRSQYTME
FGYSSNSPSTHRSYSYRPYSYRHFAPPTTPCSTDVCDSDYTPGRRAPHTSSAAVKGYTSD
LNYDSEPLPPPPTPRSQYLSAEENCESCPPSPFTERSYSHHLYPPPPSPCTDSS
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atgggtgccgtactacagagtctcttactgtgcactttgtgtttgcagattcggggcctg
ccgctgctcttgtatgcgaatcgaagggacttgcgtctggtggacgcggctcggggtcga
gggaacgcctcggtgctggtcagcggtctggaggacgcggcggctgtggattatgtttac
gagcagggactgatttactggagcgacgtgagcgaggaggccatcaaacgcacgctgttt
aacgggtcagcgcccagcgggctccagaacacggtcgtgtccggtctggcctctccggac
ggcctggcctgtgactggatggggaacaagctctactggaccgactcggagaccaaccgg
atcgaagtagcggagctggacgggacaaacaggaaggtgttgttctggcaggatctggac
cagccgagggccatcgctctggaccccaaccgagggtacatgttttggacggattggggt
gagatcccgaagatcgagcgcgctgggatggacgggacgcatcgctcggtcatcatcgac
tcggagatctactggcccaacggcctgacgctggactacgagctgaagaaactctactgg
gccgacgccaagttcagcttcatccaccgctccgagctggacggatcacacagggaggtg
gtggtgaagggctcgctgccgcacccgttcgcactgacgctgtacgaggacacactcttc
tggacggactggaacacacactccatccacgcctgcctcaaacacaccggagagaacagc
cacgagatacacaccaacatcttctcacccatggatctacacgtctacagccaggagcgc
cagccgctggacgtgacgagtccctgtgcgctgaagaatggaggatgttctcatctgtgt
ctgctgtctccggtcaaaccttattaccagtgcgcctgtccaaccggcgtccagctgctg
gacgacaaccagacctgcagagacggtgcctctcagctgctgctgctggcgcggcgcaca
gacctgcggcggatctctctggacacaccggacttcaccgacatcgtgctgcagaccgac
gacatccgacacgccatcgccatcgactacgacccggtggagggtcacatctactggacg
gacgacgaggtgcaggccatccgcaggtccttcctggacggcagcgaggctcagttcctg
gtgacctcacaggtcagtcatccggacgggatcgccgtggactggatcgcacggaacctg
tactggacggacaccggcacggaccgcatcgaggtgacccgtctgaacggctccatgagg
aagatcctgatctcggaggatctggacgagcccagggccctcgcgctggaccccgtctcc
gggttcatgtactggacagactggggtgaagtgccgaagatcgagcgggcggctctggac
gggacggagcgtctggtgctggtcaacacgtctctgggatggcccaacggtctggcgctg
gactacagccagaggaagatctactggggagacgccaagaccgacgtcatcgaggtgatg
gagatggacggatcgggtcggagggtgttggtggatgataacctgccgcacatcttcggc
ttcacgctgctgggcgactacatctactggacggactggcagcggcgcagcatcgagcgc
gtgcacaaactcagcctggagcgcgaggtgatcgtcgaccagctgcctgacctcatgggg
atcaaggccacacacgtccaccagacctttggtgtgaacccgtgtgcgcacgctaacggc
ggctgcagtcacctgtgtctctataagccgcagggcgtgtcgtgtgcgtgtcccatcggt
ctggagctcatggccgatctgagcacctgcatcgtccccgaggccttcctgctgttctcc
cgacacacggacatcaggcgcatctcgctggagaccaacaacaacaacgtagccattcct
ctcaccggcgtcaaagaagcgtccgcactcgacttcgacatcaccgacaaccgcatctac
tggaccgatattacactgaagaccatcagtcgtgcgttcatgaacggcagcgctctggag
cacgtggtggagttcggtctggactatcccgagggaatggctgtggactggctgggaaag
aacctgtactgggccgacaccgggaccaaccgcatcgaggtggccaaactggacgggcag
cacagacaggttctggtgtggaaggatctggacagccctcgagcactggcactggaccca
gccgagggcttcatgtactggacggagtggggtggacggccgaagattgaccgctcggcc
atggacggatctggacgcatcactctggtgccgaacgtgggtcgagcgaacggactgacc
atcgattacgccgagcgccggctgtactggacagacctggacaccacgctgatcgagtcc
tccaacatgatgggtctggagcgtgaggtcatcgctgacgatctgccgcacccgttcgga
ctcacacagtaccaggactacatctactggacggactggagccagcgcagcatcgaacga
gccaacaagaccagcggacagaaccgcaccgtcatacagggacacctggactacgtcatg
gacatcctggtgttccactcgtccagacagagcggctggaacgcctgcgcctccaccaac
ggacactgctcacacctgtgtctcgctgttcctgtcagcagcttcaggtgcggctgccct
gcacactactccctcaaccaggacaacaagacctgcagcgcgcccacatccttcctgctg
ttcagtcagaagacggccatcaatcgtatggtcatggacgagctgcagagtcctgacatc
atgctgcccatccacagcctgagaaacgtgcgctccatcgactacgacccgctcgagcgc
cagctgtactggatcgactccaagcagaacgccatccgccgcgcgcagcaggacgggaac
cagagcgtgacggtggtgtccggcgcgagcctcggcctgcagcccttcgacctcagcatc
gacgtctacagccgcttcatctactggaccagcgaactgaccaacgtcatcaacgtgacg
cgcacagacggctcccgggtcggagtggtgctgcgcggggaacacgaccgaccgcgcgcc
atcatggtcaatcctgagcgagggtacatgtacttcactaatctgcaggagcgctccccg
aagatcgagcgcgccgctctggacgggacggagcgcgaggtgctgttcttcagtaatctg
gggaagccggtcgctctggccgtcgacaacgagctgggaaaactcttctgggccgacatg
gacctgaggcgcatcgagagcagcgacctgtccggagccaatcggatcgtgatcgaggac
tccaacatcctgcagccggtgggtctgacggtgttcgggaacttcctgtactggatcgac
cggcagcagcagatgatcgagcgcatccataagatcacacgtgagggacgcaccaagatc
caggcgcgcatcgcctctctgagcgacatccacgccgtccgccagctccacatggacgag
tacaataaacacccctgcacctctgagaacggcggctgctcacacatctgcatcgtgaag
ggagacggatcgacgcgctgctcctgtcccgttcacctggtgctgctgcaggacgagctc
tcctgcggagagccgcccacgtgttctccggagcagttctcgtgtgtgtccggcgaggtg
gactgcatccctcaggcctggcgctgcgacggcttctctgagtgtgacgacggcagtgac
gagcgagactgtcccgtctgctccgaacaccagttccagtgcgacagcaagcagtgtgtg
gacgttactctgcgctgcaacggagagatcgactgccaggaccgatccgacgagaaccag
tgtgaagtgctctgtcccgtggatcagttcacctgcaccgacggccagtgcatcgggcgg
cacaagaagtgtgaccacaacacggactgcacggacaactctgacgagatcggctgctac
gccacagaagagccatccttctctccctcgaacaccatcggctctatcgtgggggtggtg
atggtgctgttcgtggtgggggccgtgtatttcgtgtgccagcgtgtcctgtgtcctcag
atgaaggacgacggcgagaccatgaccaatgacttcgtggtgcacgggccggcgccggtg
cctctgggatacgtgcctcaccccggctctctgaccggctcgctgccaggcatgtctcgt
gggaagtcggtcatcggctcgctgagcatcatgggaggcagcagcggtcctccgtatgac
cgagcacatgtgaccggagcctcgtccagcagctcgtccagcaccaagggcacattcttc
cctccgatcctgaatccccccccgtctcccgccacagtgaggtcacagtacacgatggag
ttcggttactcctcgaacagtccgtcgacgcaccgatcgtacagctacagaccgtacagt
taccgtcacttcgcccccccgacgacgccctgcagcacagacgtgtgtgacagcgactac
accccgggacgaagagctccgcacacgtccagcgccgcggtcaagggctacacgagtgac
ctgaactacgactcggagccgctgccgccgccgcccacccctcggagccagtacctgtct
gcagaggagaactgtgagagctgcccaccctcgcccttcacagagcgcagctactcacac
cacctgtacccacctccaccctcgccctgcacagactcgtcctga
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