Carassius gibelio (silver crucian carp): 127983367
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Entry
127983367 CDS
T08819
Name
(RefSeq) homeobox protein SIX4-like
KO
K15615
homeobox protein SIX4
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127983367
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
127983367
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_TSHZ3
Motif
Other DBs
NCBI-GeneID:
127983367
NCBI-ProteinID:
XP_052441508
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All DBs
Position
B20:complement(16129038..16135555)
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AA seq
615 aa
AA seq
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MCCLKPRGVTYQDALKMSSSSSEVISADEIKRETRGGVKLSVLDPAEMPMENAELLDCSP
ASLAFSPEQVACVCEALLQGGNVERLARFLWSLPQSDLLRGNESILKAQAIVAFHQARYQ
ELYCILENHSFSQPNHSSLQDMWYKARYIEAEKARGRPLGAVDKYRLRRKYPLPRTIWDG
EETVYCFKERSRNALKEMYKRNRYPSPAEKRNLAKMTGLSLTQVSNWFKNRRQRDRNPSE
AQSKSESDGNHSTEDECSKGQEDLSPRPLSSGSSSLVTHGTAPPTVYLDGGTTVIQQIGD
VKMPSHVAGGMNFNGDLANVNAHYINGGAYVQSHSSNALLNGLGTTSGHFLTFDPQRVSH
HGQERLLSGSSVSYAPFSMGVSETASGKLEAMQTLVSNAEDGVISSVVSFASAPSTPSTT
SGGLHLSSYSVVSLPGSETTMGLPPLMMPPSTTSSTHGSAPLGNVVSDSPQHLSQTLLYT
QTVKQEPLDVSGSYTYPSEMSLDQDSNLGYTASLFLSSSSTGGSLPPTITATVTSALSGT
GVHHTLNQAGRGIQEDSVALSSDYRSQDLQLPNSLQVVSRAGEGPVRVVCGDLDMEGKEL
AKLQTVQMDDDGSDL
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtgctgcctgaaacccagaggagtgacttatcaggacgcgctcaaaatgtcttcttcc
tcaagcgaggtcataagtgccgatgagatcaagagggagactcgtgggggtgtcaaactg
tcagtgctggaccccgcggagatgccgatggagaatgccgaacttttggactgctcaccg
gcttccctggccttctcccccgagcaggtcgcatgcgtctgcgaagcgctgctgcagggt
gggaacgtggagcgcctggccagattcctctggtcactgccgcagagtgacctgctgcgg
gggaacgagagcatcctgaaagcgcaagcgatagtcgcgttccaccaggcgcgctaccaa
gagctctactgcattctggaaaaccacagtttcagtcagccaaaccactcgtctctgcag
gatatgtggtacaaggcgcgctacatcgaagcggagaaggcgcggggcagaccgctgggt
gccgtggacaagtatcgcttacgcaggaaatatccgcttcctcggactatctgggacgga
gaggagaccgtgtattgtttcaaagagaggtctaggaacgcgctgaaggagatgtacaag
cggaaccggtacccatccccagccgagaaacgaaatctggccaaaatgacaggactttct
ctgacgcaggtcagcaactggttcaaaaacaggaggcagagagacagaaatccatccgag
gcgcagtcaaaaagtgagtcagatggcaatcatagtacagaagatgagtgcagtaaaggc
caggaggacttgtcaccacgtcccctctctagcggctcttctagtttagtcacacacgga
acagccccccctacagtttacttggatggaggaaccacagtcatccaacaaattggagat
gtcaaaatgccttcacatgtggctggaggaatgaattttaatggcgatctagcgaatgtg
aatgctcactacattaacggtggagcctacgttcagtcacacagtagcaatgctctcctg
aatggacttggcaccacgagtggccatttcttgacctttgatccccagagggtctcccat
cacggtcaggagaggctgttaagtgggtcttctgtgtcttatgctccgttctcaatgggg
gtttctgaaactgcctctggaaagctggaggccatgcagactctggtttccaatgctgaa
gatggagtcatttcttcagtggtctccttcgcttcagccccctccactccatccactacc
tcaggaggccttcatctcagcagttacagtgtggtcagtctccctggaagtgaaaccacc
atggggcttcctcccttaatgatgcccccatccacaacatcatccactcacggctctgct
cctttggggaacgtggtcagtgactctcctcaacacttgagccaaacccttctttatacc
caaactgtgaagcaggagcctttggatgtgtctggaagctacacttatccttctgaaatg
tccctggaccaagacagcaacctgggctacacagcctcccttttcctttcttcttcctct
accggtggttcacttccccctaccatcacagccacggtcacctctgccctctcgggcact
ggggtacaccacactctgaatcaagctggacgtggcatccaagaggacagtgtagccctg
tcttcagactacaggtctcaagatcttcagctgcccaacagcctgcaagttgtgtctagg
gcaggagaaggcccagtcagggttgtttgtggtgatctggacatggaagggaaagagctg
gccaagctgcagactgtacagatggatgatgatggaagtgatctatga
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