Carassius gibelio (silver crucian carp): 127983437
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Entry
127983437 CDS
T08819
Name
(RefSeq) syntaxin-binding protein 5a isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127983437
Membrane trafficking [BR:
cgib04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
127983437
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
127983437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WD40
WD40_Prp19
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
EIF3I
Lgl_C
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
Beta-prop_VPS8
Synaptobrevin
WD40_like
Beta-prop_IFT122_2nd
Motif
Other DBs
NCBI-GeneID:
127983437
NCBI-ProteinID:
XP_052441581
LinkDB
All DBs
Position
B20:10342336..10417479
Genome browser
AA seq
1095 aa
AA seq
DB search
MKKFNIRKVLDGLTAVSSPSPSPQLGAKENELIPETLQSEHFQLCKTVRHGFPYQPSSMA
FDPVQKILAIGTQNGALRLFGRPGVECYCQHESGAAVIQLQFLINEGALVSALADDSIHL
WNLRQKRPAVLHSLKFNKERITFCHLPFQSKWLYIGSERGNIHIVNVESFTLSGYTIMWN
KAIELSSKAHPGPVVHISDNPMDEGKLIIGFESGIVVLWDLKSKRADYRYTYDEAIHSVA
WHHEGKQFICSHSDGTLTIWNIKSPAKPAQTITPHGKQPKDGKKPEPCKPILKVEYKTTR
AGDPFMIFSGGLSYDTVGRRPCLTVMHGKSTAVLEMDYPIVDFLTLCETPYPNDFQEPYA
VVVLLEKDLVVIDLAQNGYPIFENPYPMMIHESPVTCCEYLADCPVDLIPALYSVGSRQK
RQGYSKKEWPISGGNWGLGTQSYPEIIITGHADGSVKFWDASAIMLQVLYKLKTAKVFEK
ARCKEEKPNTEIVDEDPFAIQLMSWCPESRMLCVAGVSAHVIIYRFSKQEITTEVVQLLE
VRLQYELNDLESPEGGGDQTPAPLTPSTSPSPQTAAPQTHTSTSSNSSDGIRDNIPCLKV
RSSPLKQSPGYQVELVVQLVWVSGEPPQQISSLAINSSYGLVVFGNSNGLAVVDYLQKTV
LLNLGTVELYGSNDPYQRQLRSPRKSRQPSGGLCDINEGSATSEDRCKSPTSDNRDNSFS
RSRSSSVTSIDKEAREAVTSFYFCETYNRKADGGLTPSLWVGTSLGTVLAISLNMPPAGE
QRLLQPVIVSPCGTLVRLKGSILRMAFLDSTGSLFPSAFEPWYEPNAPANGEERDKVRKR
RPVSVSPSTSQELNENQYAVLCSEKQAKVISLPSQTCVFKHNITETSFVLRADVVQINTG
ICVACFCANGHIMTLSLPGLRPLLDVNYLPLTDMRIARTFCFTNLGQALYLTSPTEIQRI
TYSQEVCENLQEMLGELFTPVETPEAPNRGFFKGLFGGGAQSLDREELFGESGAGKAPRS
LAQHIPGPGGLEGMKGAASGIVGDLARARIALDERGQKLSEVEERTAAMMASADTFSKHA
HEMMLKCKDKKWYQF
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttaatattcgtaaggtgctggacggcttgacggccgtgtcgtccccttct
ccatccccgcagctcggggccaaggagaacgagctcatcccggagacgctccagtctgaa
cacttccagctctgcaagactgtgcgccatggcttcccttatcagccctcctcgatggca
ttcgaccccgtccagaaaatccttgccattgggactcagaatggggctttacgattattc
ggtcgacccggtgtggagtgttactgtcagcacgagagtggagcagccgtcatccagcta
cagtttctcataaatgaaggggctctggttagtgctttggctgatgatagtattcacctg
tggaacctgcgacagaagagaccagctgtgctgcactcactcaagttcaacaaggagagg
ataacgttctgtcatctgcccttccaaagtaaatggctgtacatcggctcggaacgagga
aacatccacattgtgaatgtggagtcctttaccctctcaggatacaccatcatgtggaac
aaagccattgaactgtcctccaaggcccaccccggcccagtcgttcacattagtgacaat
cctatggatgagggcaagctcataataggatttgagtctgggatcgtagtgctgtgggat
ttgaaatcaaagagagctgactaccgatacacttatgatgaggcgatccattctgtggcc
tggcaccacgaggggaagcagtttatctgtagtcactcagacggcacactgaccatatgg
aatataaagtccccagccaagcccgcacagacaatcacgccacacggaaagcagcctaaa
gatggaaaaaagccagagccttgcaaacccattcttaaagtagagtacaagaccacacga
gcaggggatccgtttatgatcttttctggtggtttgtcgtatgacactgttggtcgacgg
ccatgcttgacagtaatgcatggaaaaagcacggcagtactggagatggattatcccatt
gtagatttcctcaccctgtgtgaaacgccatatcctaatgattttcaggaaccctatgct
gtagtggtcctcctcgaaaaggatttagttgttattgaccttgcacaaaacggttaccct
atctttgaaaatccgtatcccatgatgattcatgagtctcctgtgacatgttgtgagtac
ttagccgattgtcctgtggacctcatacctgcactttactctgtcgggtctcgccagaaa
cgacagggctacagcaaaaaggaatggcctatcagtggcggaaactggggcttgggcaca
caaagctaccctgaaataataataactgggcatgcagatggttcagtgaagttctgggat
gcttcagcaataatgctccaggttttgtacaagctgaagacagctaaggtgtttgagaag
gcacgctgtaaggaggagaaacccaacacggagattgtggatgaagacccatttgccatt
cagttgatgtcttggtgtcccgagagccgcatgctttgtgtggctggtgtctctgcccat
gtcatcatatacaggttcagcaaacaagaaatcaccacagaggttgtgcagttactggag
gtcaggttacagtatgagctgaatgatctggagtctccagaagggggaggagatcagaca
ccagctcctctcacaccaagcacctcccccagtccacaaaccgccgccccacagacacac
acatccactagcagcaactcatcagatgggatccgagacaacataccctgcctcaaggtg
cgcagcagtcctctgaagcagtctccagggtatcaggtggagctggtggtacagctggtg
tgggtcagtggagagccaccccagcagatcagcagcttggccatcaactccagctatggc
ttggtggtgtttggcaatagcaatggcctggcagtagtggattacttacagaagactgtt
ctgttgaatctgggaactgtggaattgtacggctctaatgatccgtatcagagacaactg
cgatctccccgcaagagccgacagccttctggaggactttgtgacattaacgagggctca
gccacctcagaggatcgctgcaaatcccccacctcagacaacagggacaactccttcagc
cgctcacggagctccagtgtgaccagtattgacaaggaagcacgagaggccgtcacatct
ttctatttctgtgagacatacaaccgtaaagcagatggcggacttacacctagtctgtgg
gttggcacgtccttgggcacagtcctggcaatttccctcaacatgccccctgctggagag
cagaggcttctgcaaccagtcattgtctccccttgtggaactcttgtcaggttgaagggc
agcattctccgcatggctttcctagattctacagggtctctcttcccttctgcttttgag
ccatggtatgaacccaatgcccctgccaacggagaggagcgggacaaggtccgtaagaga
cggccggtgtctgtctccccatccacatcccaggagctgaatgaaaaccaatatgctgtg
ctgtgctctgagaaacaggccaaagtcatatccctgccctctcagacctgcgtatttaaa
cacaacatcaccgaaacatcttttgtgctgcgggcagatgtggtacagataaacactggc
atttgtgtggcctgcttctgtgccaatggacacatcatgaccctcagtctgccagggttg
aggccactgctggatgtaaattacctacccctgacagatatgcggatagcgagaacgttt
tgcttcaccaacctcggccaggccttgtacctgacttcccctactgagatccagaggatc
acctacagccaggaggtctgcgagaacttacaggagatgcttggtgagctgtttactccg
gtggagacgcctgaagctcctaacaggggattctttaagggtctgttcggaggaggagca
cagtctctagacagagaagagctcttcggcgagtcaggagccggaaaagcaccacgcagt
ctcgctcagcacattccaggtcctgggggtttagaaggcatgaagggggcagcgtcaggc
attgtgggcgatctcgctcgagctcggatagcgttggacgagagagggcaaaaactgagc
gaggtggaagagcggacggcagccatgatggccagcgctgacacattctccaaacacgct
catgagatgatgttaaagtgtaaggataaaaaatggtaccagttctga
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