Carassius gibelio (silver crucian carp): 127983647
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Entry
127983647 CDS
T08819
Name
(RefSeq) DNA polymerase zeta catalytic subunit isoform X1
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
127983647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgib03400
]
127983647
Enzymes [BR:
cgib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
127983647
DNA repair and recombination proteins [BR:
cgib03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
127983647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4683
DNA_pol_B
zf-C4pol
DNA_pol_B_exo1
Motif
Other DBs
NCBI-GeneID:
127983647
NCBI-ProteinID:
XP_052441806
LinkDB
All DBs
Position
B20:complement(27714064..27819384)
Genome browser
AA seq
2653 aa
AA seq
DB search
MHLKAQKDGKDAEVAVVDEEAILSLLENSQTFLPHSQGPNQSAILDSSEDQALVDLFEAL
ADDGFRTDRSRAVSQQLSGIASYVCNSDDEEAGPELEKEESELSRIMSQRWDCDMPGPSA
AQKSPDIPLCMKEANESSSEEQQASSDEELYWKGNSALLTDLSIPQLDGAADENSDSSIT
DKESRTRSSLKAPDKILGSRNVFPNEAVCMEPPSSAKIVIEYKCAEQKLNQEDLAERHLK
SEEANEYSTGLRVNKEMPYIPPVKHPIPFKTANLPKPGAEKIGVHSLYTDENQATGLNQP
DPDDSIFGNSKLDQSIRNSTSIKNVEKKNLSIPKNHKSFFVCYSELMNCPTKTEIQLSPN
DCRRPVIHFDQTQSPMEDNQALGPQEGDTGQDKKEEDVSKLKIRYEDYQENKTERTIVAQ
QEAHYKFFPSVILSNCLSRPIKKQTGSKTGDCCSTLDPPEQRRSRLKLIKKKTTLGQKRV
SPVRTPSPMKEEGTALLSNTVGSLNQKEMYKEVDMDISDPPTIEGLIKNSVEDDLADIPT
KISCTKVSSLPGSKYTLRAKRKMTFDGENGDQASSGSFKQALVQHEGLKGKDHVFSQKKR
KLTKKEPPIIIKYIIINRFKGQKNMLVKISKIDTDEACTVLTPEKLAKYKRLAPLKEFWP
KVPESTAVKYPLLEPKVKKCPKRKAKVNPVSKRTGTSPKSRFPRAGKTRRVKHAKALITL
PKLPPPCPCYNEFTDDCCTEYSDVMVELGYLSERASSPTDSTPPRCWSPTEPLLESNSNL
INPHNDPCLGEVLAPKPYQRGIWDRSRTPRSKKTSATRPKRKANTSTKSVNKDSVKSVDS
KRKGIRMASRRHKKRCESIEGIPLEDDTSTSQKDRMLNEKQVPKRKQVRDEESDNSQALH
SVNNAPITSSSDDLTPYQDPSSLKSSQEDFTISCSGSQTVVTSPGKKSNQDVVFVFNAFA
SNELQKDTEIVLNPCIEKSLNRILSPSTKKVGHPCSVITYSNSKSQNMSQDGTVTKNLYE
LKSEVSDHEENTRTVQHLQSTRKTTIKSRRLQTKKKDTITLLDSVDCRPSLMPSAKSAIK
GGFHTGLTLSSDPKIDEMCVTELPSGLAVLKELVQKRQLKAGQDPHESDRVTEEMSSTSH
PTDIPKTAKSKTPHSATSRKPRGARTKVPKELQFKIRSKKIKPDDLRIDHLSSDDSPVIF
SDPGFDSCCSIEDSLSPELPDNYSFDINAIGQTEFSSLYSGNQFVLTDRILPQKFLSDVS
QEAINALVGLGDRTQKVFDESSKHELDWHKSGTLSPELFDKSFCESGKVYSNKVSLDSEK
IFCKDWGGSLGKIHGLSHFQDFHCEKKDVLLDPEPFSPLTSASFAYNGVSPNSDPLDGSS
ATPSSSPQSINSLSQLKNGALSSKSGGTHILKPLMSPPTREEILATLMDLDLSEATYQEP
FCSDPSDAPLKPREVGGRKLILETRLANELVEFHGDLSQNGLQFWKIAFSAMTNQAYAPN
NGCKSSILTKDKNPFSGSDQKVIMLPCKCAPSREQVQFWLQAKNQYDCLQSDKKQVGDQT
TVELGTYDRTLHQNEDYNSPSSENHDKRWNKKDEKASELQSIRRNSLSLPLHISPVKAAS
SNSSPKSTKCILDIETNKGCQITSPYSPDLSTLQQISAEIKEDEDQKDLTDLLQSHSLEQ
SQNLNDTSLESVHPKDLLSPSVFPVKHLDSDVKCSYQLHSTPVHRRSYIDDDGSSYSPIR
NEDIKPRSQQIHQKGNKNKDALRRVLLTTQMKNQLTTMNVQKRENSQIEGPSICNSYGFK
VSMQNLQEAKALHEVQHLIMISMELHARTRRDLEPDPEFDPICALFYCLSSDVPLPNCGT
TQMTGAIVIDKDCCSSAQASSNTAPLLFKSGVTGLLVTYVSDEKELFEEVTNVLRKYDPD
ILVGYEVQMHSWGYLLQRSSTLGIDLCQQLSRVPGDAKENRFTAEKDEYGADTMTEIHIV
GRVVLNLWRIMKTEAALNNYTFENVAFHLLHQRFPLYSHRTLSDWFDHNTHLHRWKVVDH
YVSRVCGTVQLIQQQDIIGRTSELARVFGIQFYHVLTRGSQYRVESMMLRIAKPMNYIPV
TPSTQQRAQQRAPQCIPLVMEPESRFYSNSVIVLDFQSLYPSIIIAYNYCFSTCLGRVEN
LGTCDEFRFGCTSLRVPPDLLYQLRNDITISPNGVAFVKSSVRKGVLPSMLEEILKTRIM
VKQSMKAYKNDKALLRLLDARQLGLKLIANVTFGYTSANFSGRMPSVEVGDSIVHKARET
LERAIKMVNDTKKWGARVVYGDTDSMFVLLKGATKEQAFKIGNEIAEAVTATNPKPIKLK
FEKVYLPCVLQTKKRYVGYMYESLDQKNPVFDAKGIETVRRDGCPAVAKILERSLKLLFE
SRDISHVKQYVQRQCVKVLEAKASMQDLIFAKEYRGSGSYRPGACVPALELTRRMMAYDR
RLEPRVGERVPYVIVYGMPGVPLIQLVRRPVEVLQDASLRLNATYYITKQILPPLARIFN
LIGVDVFSWYHELPRVQKAWSSVNGGGEEGTRKGTISQYFTTLHCPVCDELTQLGVCEGC
RAEPQRVVVHLHQDLRLWESQLDQLQKVCRSCSGSAERQVPCVSLDCPILYKLSRVNRSL
SRGPYLRQLLEQF
NT seq
7962 nt
NT seq
+upstream
nt +downstream
nt
atgcatttaaaggcacaaaaagacgggaaagatgctgaagtggcagttgttgatgaagag
gccattttaagtttgttggaaaacagtcagaccttcctccctcattctcagggacccaac
caatcagcaatacttgacagcagtgaagaccaggctttggttgatctgtttgaagcgttg
gctgatgatggatttagaaccgacaggtccagagcagtgtcccagcagttgtctgggatt
gctagttatgtctgtaacagtgatgatgaggaagctgggcctgagctggagaaagaggaa
tcagagctcagtagaatcatgtcccaaagatgggactgtgacatgccaggaccttctgct
gcacaaaagtcaccagacatcccattatgtatgaaagaagcaaacgaaagctccagtgaa
gagcaacaggcctcatcagatgaagaattatattggaagggaaacagtgctctacttact
gatctgtccattccacagttggatggagctgcagatgagaatagtgattcatcaataaca
gacaaggaatcccggacacgctcgtcacttaaagcaccagataagatccttggaagcaga
aatgtttttccaaatgaagctgtttgtatggagccaccatcttctgctaaaattgttatt
gaatacaaatgtgctgagcagaaactcaatcaagaggatttagcagaaaggcatttaaaa
agtgaagaggcaaatgaatattcaactggattaagagttaacaaagagatgccatatatc
ccaccagttaaacacccaattccttttaagactgcaaatttacctaaacctggtgctgaa
aaaataggtgtacactctttatacactgatgaaaaccaagccactggccttaatcagcca
gatcctgatgattcaatttttggaaactctaaacttgaccagagcataagaaattctacc
agtattaaaaatgtggaaaaaaaaaatttatccatccccaagaatcacaagagcttcttt
gtatgttactctgagctgatgaactgccccaccaagactgaaatacaactcagtccaaat
gactgcagaagacctgtgatacattttgaccagacacaaagccctatggaagacaaccaa
gctttgggccctcaagaaggtgacacaggacaggataaaaaagaggaagatgtcagcaaa
ctaaaaataaggtacgaggattaccaagagaataaaactgagaggacaattgtggcacaa
caggaggcacactacaaattttttcccagcgttattctgtctaattgcctctccagaccc
atcaagaaacagacagggagcaagactggggattgttgctctaccttagaccctcctgag
cagcgaaggtcaaggttaaagttgatcaaaaagaagacaacattgggtcaaaaaagggta
agtcctgtgaggaccccgtctcctatgaaagaagaaggcacagcacttctttccaacact
gtaggctctcttaaccagaaagaaatgtataaggaggttgacatggacatttcagatcca
ccaaccattgaaggtttgatcaagaactcagtagaggatgatcttgcagatattccaacg
aaaatctcttgcaccaaggtgtccagtttaccaggtagcaaatataccttgcgggcaaaa
aggaaaatgacttttgacggtgaaaatggagatcaggcaagttctggttctttcaaacaa
gctttggtgcaacatgaaggccttaagggcaaagatcatgtctttagccaaaaaaagagg
aaactgactaaaaaagagccaccaatcatcattaaatatataatcattaacagattcaag
ggtcagaagaacatgttagtgaagatttctaaaattgacactgatgaagcttgcactgtt
ttaacaccagaaaagcttgccaaatacaaaagacttgctcctctcaaagaattctggcca
aaagtgccagagtctacagcagtgaagtacccactacttgagccaaaagtaaagaagtgt
cccaaacgaaaggctaaggtgaacccagtgtcaaagagaactggcacctctccaaaatct
aggtttccacgagctggtaagactaggagggtgaagcatgcaaaagcactgataacttta
ccgaaattaccccctccatgcccttgttataatgagttcactgatgactgctgtacagag
tattctgatgtgatggtggagttgggttatttgtcagaaagagcctcaagtcctactgat
tcaaccccacctaggtgttggtctcctactgagcccttactggaatcaaattcaaatcta
ataaacccacataatgatccatgtctaggtgaagtactagctccaaaaccataccaaaga
ggtatttgggatagaagcagaacacccaggtctaaaaagacttctgctaccagaccaaaa
agaaaagctaatacttcaacaaagtcagtgaataaagattcagtgaaatctgtggactca
aagaggaaaggtattcgaatggcttcaaggagacataagaaacgttgtgaaagtattgaa
ggaatccctttggaagatgacacctctacctctcagaaagacaggatgctgaatgagaag
caagtcccaaaaagaaagcaggtccgagatgaggagagtgataattcacaggctctacat
tctgttaataatgcacctattacttcctcatctgatgacttaactccttatcaggatccc
agttctctaaaaagcagtcaagaggactttactattagttgttcaggctctcaaacagtg
gtcactagccctggaaaaaaatctaatcaagatgttgtttttgtcttcaatgcctttgcc
tcaaatgaattacagaaggacacagagattgttctcaatccctgtattgaaaaatcttta
aatcgtattctttccccttccaccaagaaggtaggacatccatgttccgtcatcacatac
agcaattcaaaatcacaaaatatgagtcaagatgggactgtcacaaaaaatctatatgaa
ttaaagtcagaggtctctgaccatgaagagaacaccagaactgtacagcatttgcagtca
accagaaaaacgaccattaaatcaagaagactgcaaacaaaaaagaaagacaccataact
ttattggattctgtcgactgtagaccctcccttatgccctctgctaagagtgcaattaaa
ggtggatttcacacaggtctaacattgtcctcagaccctaaaattgacgaaatgtgtgtc
actgagttaccttctgggcttgctgtgttgaaggaacttgtccaaaagaggcaactcaag
gccggacaggacccacatgaaagcgatcgtgtgactgaggaaatgtcttctaccagtcac
cctactgatattcccaaaacagccaaatctaaaacacctcattcagcaacctcaagaaaa
ccaaggggtgcaagaacaaaagtaccaaaagaattacagttcaaaatcagaagtaaaaaa
attaaaccggatgatttgagaattgaccatctttcatcagatgatagtcctgtgattttc
tctgaccctggctttgacagctgttgctcaattgaagatagcttgtccccagagctccca
gacaattacagctttgatatcaatgccattgggcaaacagagttctccagtctttattct
ggcaaccagtttgtgttaactgataggatcttgcctcagaagttcctcagtgatgtcagt
caggaggcaatcaatgcccttgttgggttaggcgacaggacacaaaaggtgtttgatgag
agcagcaagcatgaactggactggcataagtctgggactctaagtccagaactgtttgat
aagtcattttgtgaaagtggcaaagtttattccaataaggtatctcttgattcagaaaaa
atattttgcaaagattggggaggctctttaggtaaaattcatggccttagccactttcag
gactttcactgtgaaaagaaagatgtgttgctcgacccagagcccttttccccccttact
tctgcttcttttgcttataatggtgtttccccaaatagtgatcccctagatggcagttca
gcaacaccaagcagttccccacagtccatcaactcactgtcccagctaaaaaatggagct
ctgagttcaaagagtgggggaacacacattctcaaacctctcatgtctccacctactcgg
gaggaaatcttagctactctgatggatctggacctctcagaagccacctaccaggaacca
ttctgcagtgacccatcagatgcacccttgaagccaagggaggttggtggtcgaaaattg
attctggaaaccagactggcaaacgaactagttgaatttcatggagacttatctcaaaat
ggcttacaattttggaaaattgcattttctgcaatgacaaatcaagcctatgcaccaaat
aatgggtgtaaatcctctatactgaccaaggacaaaaacccattttctggcagtgatcaa
aaagtgattatgcttccctgcaagtgtgccccaagtcgagaacaggtacagttctggttg
caagcaaaaaaccagtatgattgccttcagagtgacaagaaacaagtgggtgaccagaca
actgtggaacttggaacatatgacagaaccttacatcaaaatgaggactataattcacct
tcctcagagaatcatgataaaaggtggaataaaaaagatgaaaaggcttcagagttgcag
agtatccgtaggaatagtttaagtttaccactccatatttcaccagttaaagcagcttca
tctaacagtagccctaagagtacgaaatgcatcttggacatagagacaaacaaaggttgt
cagatcacttctccatattctcctgatctttctacattgcaacaaatatctgctgagatt
aaagaagatgaggaccagaaggatttgactgatttattacaatctcacagcttggagcag
tctcaaaatctcaatgacacatcacttgaaagtgtacacccaaaggacctcttgagtcca
tcagtttttcctgtcaaacacctagattctgatgtcaaatgctcttaccagctccatagc
acacctgtccaccggagaagctacattgatgacgatgggtctagctacagtccaataaga
aatgaagacataaagcccagatcacagcaaatacatcagaagggtaacaaaaacaaagat
gccttacggagagttttgcttaccacacaaatgaagaaccagcttaccactatgaatgtt
cagaagagagaaaactcccagattgagggaccatcaatctgtaattcatatggctttaaa
gtcagtatgcagaacttgcaggaggccaaagcattgcatgaggtacagcacctcataatg
ataagcatggagcttcatgcaaggactcgtcgtgaccttgagcctgaccctgaatttgac
ccaatttgtgctttgttctactgcctcagttctgatgtccctctcccaaattgtggcact
acccagatgacaggtgccattgtcattgataaagattgttgttcttcagctcaagcctcc
agcaacacagcgccactgctttttaaatctggtgtgacgggactgctggtgacctatgtc
agtgatgagaaggagctttttgaagaggtcacaaatgttcttagaaagtatgacccagac
attctggttggatatgaggtccaaatgcactcttgggggtatctactgcaacgttcatca
acactcggtatagacctgtgccagcaactctcccgtgtgccaggagatgcaaaagaaaat
cggtttacggcagagaaagacgaatatggtgcagacactatgacggaaatccatattgtt
ggacgtgttgtcctcaacttgtggaggattatgaagactgaggctgcactgaataactac
acttttgagaatgtggcttttcacctcctgcatcagcgctttcctctctacagccatcgc
acactgtctgactggtttgaccacaacacacacctgcacaggtggaaagtggtggatcat
tatgtgagccgtgtgtgtggcacagtccagttgatccagcagcaggatattatcggcagg
acaagcgagttggcacgtgtgtttggaatccagttctaccacgtgctaactagggggtca
cagtaccgtgtggaatcaatgatgttaaggattgcaaaaccaatgaattacatcccagtc
actccaagcacacagcagcgtgcccagcaaagagccccacagtgcattccgctcgtcatg
gagccagagtcgcgtttctatagcaactctgttattgtgttggatttccagtctctgtat
ccatccatcatcattgcctacaattactgtttctccacctgccttggacgcgttgagaat
cttggaacgtgtgatgagttcaggtttggttgtacatctctgagagtccctcctgatctt
ctttaccagctcagaaatgacatcaccatttctcccaatggtgtcgcatttgttaagtca
tcagtgcggaagggtgtcctgccaagtatgctggaggagattctgaagacgaggatcatg
gtgaagcagtcaatgaaggcgtacaaaaatgacaaagctctattacgcctgctggatgca
aggcagcttggccttaaactgattgctaatgtcacatttggttatacttctgccaacttc
tcaggacgtatgcccagcgttgaggtaggtgacagcattgtgcacaaggcccgagagact
ttggagagagccataaagatggtcaatgacacgaagaagtggggagcacgtgttgtctac
ggagatacagacagtatgtttgtgttgttgaaaggagcaaccaaggaacaggcatttaag
attggtaatgaaattgcagaggctgtcactgctaccaaccctaaacctatcaaattgaag
tttgagaaggtgtacctcccgtgcgtgttacagacaaagaagcgttatgttggatacatg
tatgagagcttggatcaaaaaaacccagtctttgatgccaaaggcattgaaactgtacgt
cgtgatggctgccctgctgttgccaagattctggagagatctctgaaactgctttttgag
tcacgtgacatcagccatgttaagcagtatgtgcagcggcagtgtgtgaaggtgctagag
gccaaagccagcatgcaagacctcatttttgccaaagagtaccgtggcagcggatcgtac
cgaccaggggcctgtgtacctgctctggaactcaccaggcgtatgatggcgtatgatcga
cgcttagagccacgcgtgggcgagcgtgtaccatatgttattgtgtatgggatgccaggt
gtgccgctcatacagctggttagacgtcctgtagaggtactgcaagacgccagtctgcgc
cttaatgcaacctactacatcaccaagcagatcttgccaccactcgcacgaattttcaac
ctgattggagtagatgtgttcagctggtaccacgagttgccaagggtacagaaggcgtgg
agctctgtgaatggaggaggggaggagggcacaagaaaaggcaccatctctcagtatttt
accacgctgcattgcccggtttgtgatgagctgacacagctaggagtgtgtgaaggctgt
cgggctgaaccacaacgtgttgttgttcacctacaccaagacttgcggctttgggaaagc
cagctagaccagctccaaaaggtatgtagaagttgcagtgggagtgcagagcgtcaggtg
ccatgtgtctcattggactgccctatactctacaaattatctcgtgttaatcggagtctt
tcccgaggaccataccttcgccagctgctggagcagttctga
DBGET
integrated database retrieval system
