Carassius gibelio (silver crucian carp): 127983794
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Entry
127983794 CDS
T08819
Name
(RefSeq) AT-rich interactive domain-containing protein 1B-like isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127983794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127983794
03021 Transcription machinery [BR:
cgib03021
]
127983794
03036 Chromosome and associated proteins [BR:
cgib03036
]
127983794
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Helix-turn-helix
ARID
127983794
Transcription machinery [BR:
cgib03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
127983794
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
127983794
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
127983794
NCBI-ProteinID:
XP_052442085
LinkDB
All DBs
Position
B20
Genome browser
AA seq
2162 aa
AA seq
DB search
METGLLANHQVKNVVSGDPPPSPHHRTPPQQQSQASLHQQQPQQRAVHNNNNNIHPTPVR
GDRQQHGGKENALETQVDRHPRLLNTSDEEERSSTTGGDRMGSRYEHSHFGPTSNNNNNN
NSGGSASQSGNSSVSEFNHYYGNGRGGPCFDQHGGQQSPRTALMHQAQGSMDQVQNSHEG
YHNNPYNHYPNYRPGYGGAGYGMMSPSRQGNMIGPVTNSPNAAAASHGKAAMASNTPAPG
ANVGGFPRFPGQNQQHPSGATPTLNQLLTSPSPMMRGYGSGYQDYITPQQQQQQPGMGLG
KDMSSPYSPAASHGWGAQQRNHPAMSHGNNGNSRAQVAPMDPMAMKRSQMYAMGNSPYSQ
SGGTYPGQPYGSPTPHRYPMGIQGRGQVGMGGMQYPQQQQMPAQYGSQGMGGYCQQGQPP
YFSPPQHQSAAPSQPPYMQQRAPAQQETLQEGYGSRGQSGKPNHDDMSLTQQDRPSSLPD
LSGSIDDLPTGTEAGLSSAVSASGSTSSQGEQSNPAQSPFSPHASPRVPSMRSGPSPSPV
GSPVGSSQSRSGPISPASGPGAQMAPQTPGNVPDTGSHSTHSQSPMSQERGFAPNMQRNA
PGPQFGGQQPGPSMSPHSCPTGPMHHSVSSYQLGTSYGPQSAQYGPSGNYTRPPNYGGAP
GANYSGPGPGMANSLAMNASSPMHGQGPGQPCGSVTTARGPGHAAGGRPYPAGSSSVAPA
SPNMPQSAGPGMGPPPLNVSRKPHESGPGSGQQNPVPSGQPRPPFGRSPVYPGLSGPGGR
PASFPVPHPHHPHCSSGQSQGQPHAELYGPGGYQGGPHMLGMGPGGPYNHPASNSSARMI
PQGPSYNTMPTGPMTGSGDSMMPTDPKKEEGSTPTTEPPKPKDNYGSQCLSQPPTPSPLS
PSPASLSSYQGDDSDSISSPAWPKNPSSPKHSSGNMTNERITRLYDMGCEPERRAWVDRY
IAFMEERGTPVPNLPSVGKKPLDLCRLYLCVREIGGLAMVNKNKKWRELSTHLNVGTSSS
SASSLKKQYIQYLFAYECKVERGEEPPPDAFTTGDGKKQPQQAKIQPPSPANSGSLQGPQ
TPQSTGSSTMTEMPGDLKPPTPASTPHGQVTPQQTGRNSGVSVQDPFSESSDPAFQKRGP
MHGGSSGDASSRMQFDTSKDPYGAARKGGSEPFIPGQMPGSGMQEMYPRGPPSGMGMGPR
PQYPYNPGFERRPDHVMGPEGGIVPPGNQNSMVPSNSDPSMFSGNRYASHQRHGHDGYGQ
QYPHSMPYSAHGMYPQQQGYKRPGEGMYGPPAKRHESEAYGLQYGGQQTDMYSQYGYPER
RPMQSPFPYPYGRDRMQPGGQGPPQHSMMSGGPPPSSNSSGGPQGNMWHTRHDMSYPYPG
RQGHGAPYPSMSRGDDPEVRAGQDSQWPGQRQSPYPPPHSSSSSSSMTPMTSRQPPSSYQ
SPPAMPNHISRVPSPSPFPRSVGGSMSPNKALMMASMKQMQKPGGPGSMPNSQSSGLPGQ
GFPTIHREATYPLDSVEATQPQLKPRRRLTSKEIGTPEAWRVMMSLKSGLLAESTWALDT
INILLYDDNTVSSFGLSQMPGFLELIVEYFRRCLIEIFGILEEYEVGTEGQKTLLGPSSE
PTETEQPSNQDLKSQSGSELVERLDVEPEKPQPSSSEATLNMEKREDSAEVKVDTGEEPC
PPVEPRPKQASKYDRLPVKVEEREAVADCVEDRSELLGLAGEFTSGLLHWTAGGGDSTAH
IQTHFERRREEEEEEEQKPSEIQDGAQAPGQETVEGEHGREEELKRELPGPSEENLTATV
DDMLSSRNSETLETQTSFSFRNKENQSGIALLEDEPRCWDEAPLSVAEGWQDELAKRCVC
VSNIIRGLSFVPGNDSEMARHPGLVLILGKLVLLHHEHPKRKRMPPTYQREEERGLACSK
DEWWWDCLGALRENTLVTLANISGQLDLSIYPESICLPILDGLLHWMVCPSAEAQDPFCT
ANGFSSLTPQRLVLECLCKLSIQDSNVDLLLATPPFSRQEHLFATLVRHVGERKSQVCRE
MAVAVLSNLAQGDPTAARAVALHKGSVGALISFLEDSVAMAQYQQSPHSLLGHMGHSTHP
EPPSINMMCRAAKALLAMARVEENRPEFVLYESRLLDISLSSVLNSGVAAILCEVLFKLG
RS
NT seq
6489 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgggtctgctcgcgaatcatcaagtgaaaaatgttgttagcggagatccccct
ccttcgcctcatcatcgcacacctccacagcaacagtcgcaagcatcactccatcagcag
cagccacagcagcgagccgtgcacaacaacaacaacaacatccacccgacacccgtgcgc
ggggatcgacagcagcatggagggaaagaaaacgctctggagacgcaggtcgatcgccat
ccgcgtttgctgaacacaagcgacgaggaagagcgctcgtccacgaccgggggggatcgg
atgggcagcaggtacgagcactcacacttcggaccaacgagcaacaataacaacaacaac
aacagcggcggcagcgcgtcccaaagcgggaacagctccgtttctgagtttaatcattat
tacgggaatggaagaggagggccttgctttgatcaacatggcggacaacaaagccctagg
acggctttaatgcatcaagcacagggcagcatggatcaagtgcaaaactcccacgaaggg
taccataataatccgtacaaccactaccccaactaccggccggggtacggtggcgctgga
tacggtatgatgagcccgtcgcggcaggggaacatgataggcccagttaccaactcgcct
aatgccgctgctgctagtcatggcaaggctgctatggcctcgaataccccagctcccggt
gccaacgttgggggctttccgaggttccccggacaaaaccaacagcacccctctggagct
acacccactctaaaccagctcctgacctctccgagtccgatgatgcgcgggtatggcagc
ggttatcaggactacatcaccccgcagcagcagcagcagcagcccggcatgggtctgggc
aaagacatgagctccccgtacagccccgctgccagccacggctggggagcacaacaaaga
aaccacccggccatgagccacgggaataacgggaacagcagagctcaggtggcacccatg
gaccctatggccatgaagcgttctcagatgtatgcgatgggcaacagtccctactctcag
tcaggaggaacatatccagggcagccatacggatcacccactcctcaccgatacccaatg
ggaatacaggggcgtggccaagtgggcatgggagggatgcagtaccctcagcaacagcag
atgccggctcaatatgggtcccagggaatgggtggctactgtcaacagggtcagccccca
tacttcagtcccccacagcatcagtctgcagccccctctcaacccccttacatgcagcag
cgcgctccagcacaacaggagactctgcaggagggatatggtagcaggggccagtctggg
aaaccaaaccacgatgacatgagtcttactcagcaggatcgcccgtccagcctcccggat
ctatctggctcaatagacgacctccccaccggaacagaggcgggtctcagttcggccgtc
agcgcttcgggttccaccagtagccagggagaacagagtaaccccgcccagtcgcccttc
tcaccccacgcctcgccccgggtccccagcatgagaagcgggccctcgccctcgccggtt
gggtcacctgtgggctccagccaatcacgatctgggcccatatcacctgccagtgggcca
ggtgcacagatggcccctcagaccccagggaacgttccggacacgggctcccattccact
cacagtcagtcgcccatgtctcaggagagaggatttgcacctaacatgcaacgcaatgca
cctggtccccagtttggaggccagcagcctggaccttctatgtctccacactcctgtccc
actggccctatgcaccatagtgtgagctcctatcagctgggcacctcttacgggccccag
agtgcccagtatgggccttcaggtaactacacacgccctcctaactatggcggggcacca
ggtgccaactacagcggccccggcccaggcatggccaacagtcttgccatgaatgccagc
agtccaatgcacgggcagggtccagggcaaccctgtggctctgtgaccacggctcgagga
ccagggcatgcagccggcggccggccgtacccagcaggctccagcagtgtggctccagcc
tcaccaaatatgcctcagtccgctggcccaggaatgggtccacctcctctcaacgtcagt
cgcaaaccccatgaaagtggccctggatctggccagcagaacccagtcccctctggacag
cccaggcctccctttggcaggtcccctgtatacccgggcctgtctgggcctggaggacgg
ccagcctccttccctgtccctcacccccatcaccctcactgcagttctgggcaaagccag
ggccagcctcacgctgagctgtatgggccaggcgggtatcagggtggtccccacatgctt
gggatgggtcctggaggcccctacaaccatccagcaagcaacagctcagccaggatgatc
cctcaaggaccgtcctacaacacaatgcccacagggcccatgacaggctcaggggacagc
atgatgcccaccgatcccaaaaaggaggagggcagcacacccaccacagagcctcctaaa
ccaaaggacaactacggttcccagtgtttgtcccagcctcccaccccgtcccctctgtcc
cccagcccagctagtctgtcctcttatcagggggacgacagcgatagcattagcagccct
gcctggccaaagaaccccagcagccctaagcacagctcggggaacatgacaaacgagagg
ataacacgactgtacgacatgggctgtgagccggagaggagggcatgggtggatcgctac
atcgccttcatggaggagaggggcacgcctgtccccaacctgccctccgtaggcaagaag
ccgctggatctgtgccgcctctacctctgtgttcgagaaatcggaggcttggctatggtc
aataaaaacaagaaatggagagagctgtccacccacctgaatgtggggacatccagcagc
tctgccagttccctcaagaagcagtacatccagtacctgttcgcctatgagtgcaaggtg
gagcgcggagaggaacccccacccgatgcgttcactacaggagacggcaagaagcagccg
cagcaggccaagatccagccaccatcacccgcaaactcgggctctcttcaagggccacag
actcctcagtctacaggcagcagcactatgacagagatgccaggggacctaaagccgcca
acaccagcgtccacaccccatggacaagtgacccctcagcaaacgggcagaaacagtggt
gttagtgtgcaagacccgttctctgaaagcagcgacccagcctttcaaaagcggggtccc
atgcacgggggaagcagtggagatgcctcctccagaatgcagttcgacaccagtaaggat
ccttatggagctgctaggaaaggtggctctgagcccttcatccccgggcagatgccaggc
agtggcatgcaggagatgtatccacgtggaccgccctccgggatggggatgggcccacga
ccccagtacccctacaaccctggctttgagaggaggccggaccatgtcatgggtccagag
gggggaattgttccccctggaaatcagaacagcatggtgccttccaacagtgatcccagc
atgttctcaggcaacagatacgcttctcatcagagacatggacatgacggctatggacag
cagtaccctcacagtatgccatatagtgcacatgggatgtatccccaacagcagggttat
aagcggcctggggaagggatgtacggccctcctgcgaagcgccatgagagtgaagcctat
ggtttgcagtacggtggccagcagactgacatgtatagccaatatggttacccagagcgc
aggcccatgcaaagcccgttcccctatccatatggacgcgatcgcatgcagccaggtggg
cagggacctcctcagcacagcatgatgagtggtggaccacccccatcctccaactccagc
ggtggtcctcaagggaacatgtggcacaccaggcacgacatgagttacccttaccccggc
cggcagggacatggggcgccctacccctccatgagccgtggagatgatccagaagtcagg
gccggtcaggacagtcagtggcctggtcagcgtcaatccccctaccccccaccacactct
tcgtcctcttccagctccatgacccccatgactagccggcaaccaccttcttcctatcaa
tctcctccagcgatgccaaaccatatctctcgagtcccaagcccttcaccattccctcgg
tctgtggggggctctatgtcgcccaataaggctctcatgatggcctctatgaagcagatg
caaaagccaggaggcccagggtcgatgccaaactctcaaagtagtggtcttcctgggcaa
ggcttcccgacaatccatcgggaagccacttacccactggactctgtggaagctacgcag
cctcagcttaaacctcgccgaaggttaacatccaaagaaattggcacaccagaggcttgg
cgtgtgatgatgtccctgaagtctggtttgcttgctgagagcacatgggccctggatact
ataaacatcctgctttatgatgacaacacagtgtcttcctttggcctgtctcagatgccc
ggtttcttggagctcattgttgaatatttcagaaggtgcttaatagagatctttgggatc
cttgaagaatatgaagttggaacagaaggtcagaaaactcttcttggtccatcgtcggag
cccaccgaaacagagcaaccttccaatcaagacttaaaaagccaatccggttcagaactg
gtggagagattagatgtggagcctgagaaacctcagccaagcagctcagaagcaacactc
aatatggagaaaagggaagactctgcggaggttaaggtcgacactggtgaagaaccatgt
ccaccagtggagcccagacccaagcaagccagcaagtatgacagactcccagtgaaagtt
gaggagagagaggctgtggccgattgtgtggaggatcgatccgagctgctaggcctggcc
ggggagttcaccagcgggcttctgcattggacggctggtggaggggactccactgcccac
atccagacccatttcgagagacgtagagaagaagaagaagaagaagaacagaagccctca
gagattcaagacggtgcacaggcaccaggacaagaaacggttgaaggggagcacgggagg
gaagaggaactgaaaagagagcttccagggccctcagaggagaacttgacagccaccgtg
gatgacatgctaagttctcgaaactcagaaactctcgaaactcagacatcattctccttc
cgcaacaaagagaaccagagcggcattgccttgctggaggatgagccccgatgctgggat
gaagcacctctttcggtcgccgagggctggcaggatgagttggccaagcgctgcgtctgt
gtgtccaatatcattcgtggactctcattcgtcccgggcaatgacagcgaaatggctcgg
cacccaggtttagtgctcattctcgggaaacttgtgcttctgcatcatgagcaccctaaa
aggaaaaggatgccacctacctaccagcgagaggaagagcgaggactggcttgcagcaag
gacgaatggtggtgggactgccttggtgccttgcgtgagaacaccttggtcacccttgcc
aacatttcaggacagctagacctgtccatctatccagaaagtatctgccttcccattctg
gacgggcttctccactggatggtgtgcccctcggcggaggcccaggaccccttttgcacg
gcaaatggcttctcctcgctcacgccgcagaggctggtgctggagtgtctgtgcaaactg
agcatccaagactctaacgttgaccttctgctggccacgcctccttttagcagacaggag
cacctcttcgccacattagtgcggcatgtcggtgagcgaaagagtcaggtgtgccgcgag
atggccgtagccgttctctccaatcttgcacagggtgaccccacagctgcccgagccgtt
gccctgcacaagggcagcgtgggagccttgataagcttcctagaggacagtgttgcaatg
gcacagtatcagcagagccctcacagtctcttgggacacatgggacactccacccatccc
gagccgcctagcatcaacatgatgtgtcgggccgccaaagccctgctggccatggcccga
gtggaggagaacaggcctgagtttgtgctctacgagagcaggcttcttgatatctcgctg
tcctccgtgctgaactctggcgtggcggccatcttgtgcgaggtactgtttaaactcggc
cgctcgtga
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integrated database retrieval system
