Carassius gibelio (silver crucian carp): 127983796
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Entry
127983796 CDS
T08819
Name
(RefSeq) poly(A) polymerase beta-like isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127983796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127983796
Enzymes [BR:
cgib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
127983796
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
127983796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
DUF4269
Motif
Other DBs
NCBI-GeneID:
127983796
NCBI-ProteinID:
XP_052442091
LinkDB
All DBs
Position
B20:complement(22820957..22836794)
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AA seq
737 aa
AA seq
DB search
MPFPVQPAQQTPKHYGITSPISLAQPKEADLVLTRKLTETLRPFGVFEEELELQRRILVL
GKLNTLVKLWIREVSEVKNIPASVIDNVGGKIFTFGSYRLGVHTKGADIDALCVVPRHVE
RSDFFSSFYEKLKEQEEVKDLRAVEEAFVPVIKLSFDGIEIDILFARLALQAIPENLDLR
DDGLLKNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRAIKMWAKRHNIYSNILGFLG
GVSWAMLVARTCQLYPNAVASTLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVT
PSDRYHLMPIITPAYPQQNSTYNVSASTRAIMVEEFKRGLAITDEILQNKAEWSKLFEAP
NFFQKYKHYIVLLASAQAEKQHLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPGPK
EGTDKEEFSTMWVIGIVFKKMEGSENLNVDLTFDIQTFTDTVYRQAISSKMFEQDMKITA
MHVKRKQLQQLLPKMTIQRSKRKLSSDGLRAMNDGSLDLSVDSDNSMSVPSPTGPSAAKV
ARAPSPQGSTGTATNTSDLQGKTDASRGSSLLAGAVDTTKPDSVGTSSNNAPQKGASPLK
RPASPVQHDSEKKAKVDCVQQNPVPSPCLSADPAIKTPDSPLENEMSKKAKADELSSPEA
ESSGETDGQVAVDPAPSVEVVPSEDESKTETELTVVDPAEVIPPARKMSNADLSDVPLVP
TNPIAVVKNSIKLRLSR
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgcctttcccagtgcaaccagcccagcagaccccaaagcattatgggatcacgtctcct
atcagcttggcgcagcctaaagaggccgatctggttctcacgcggaagctgaccgagacg
ctccgacctttcggcgtctttgaggaggagctggagctgcagcgcagaatcctagtgctt
gggaagctaaatacgttggttaagctgtggatccgtgaagtcagtgaagttaagaatatt
ccagcatcagtgattgataatgttggtggaaagatcttcacgtttggatcctacagactt
ggagttcatactaagggtgctgatattgatgctctctgcgttgtgccccgtcatgtggag
agatcggacttcttctcctcgttctatgagaaattaaaggagcaggaggaagtcaaagac
ctaagggcggtggaggaagcgtttgtgccagtgataaagctgtcttttgatggaattgag
attgacatactatttgcccgactggcgctacaagccattccagagaacctggatttgcga
gatgatggcttgctgaagaaccttgacattcgctgcatccggagtttgaacggttgcaga
gttactgatgaaattcttcacttggtgcccaacatagagaatttcagactgactctaaga
gccatcaaaatgtgggccaaacgtcataacatctactcaaatattctgggttttctgggg
ggcgtatcgtgggccatgttggttgcaagaacctgccaactctaccccaatgctgtggca
tccacactggtccataagttcttcttggttttctcaaagtgggaatggccaaatccagtc
cttctgaagcagcctgaagactgtaatctcaacctcccagtttgggatcccagggtaacc
cccagtgaccggtaccacctcatgccgatcatcacaccagcttaccctcaacaaaactcc
acttacaatgtgtccgcttctactcgggccatcatggtggaagagttcaagcggggtctt
gcgatcacggatgaaatattgcagaataaagcagaatggtccaaactatttgaagcacca
aacttctttcagaaatacaagcattatatagtgttgctagcaagcgcacaggcagagaag
cagcacttagagtgggtgggcctcgtggaatcaaagatccgaatcctggtgggaaacctg
gagaagaatgagtttatcacactcgctcatgtgaatccacagtcattcccgggaccaaaa
gagggaactgacaaggaggagttcagcacaatgtgggtaataggtattgtgtttaaaaaa
atggagggatcagaaaatcttaacgtggatctgacgtttgacatccagaccttcacagac
acagtttaccggcaggcgatctctagtaaaatgtttgagcaagatatgaaaatcacagcc
atgcacgtgaagaggaagcaactgcaacaactgctgcccaaaatgaccattcagaggagc
aagagaaagctttcatctgatggtctccgtgcgatgaatgatggcagtctcgacctatca
gttgacagtgacaacagcatgtcagtgccgtcccccacgggcccttcagctgccaaggtc
gcccgtgcccccagccctcagggctccactgggactgctacaaacacctcagatttgcag
ggaaaaacagacgcttcaagaggaagctcgctcctggcaggtgcagtggacaccactaag
ccagatagtgttgggacttccagcaacaatgccccgcagaagggagcctctccactaaag
cggcccgcctcacccgttcagcatgactcggagaagaaagccaaagtggactgtgtacag
cagaaccctgttcccagtccatgtttatctgctgaccctgccataaaaacacctgactca
ccccttgagaatgagatgtccaagaaagccaaagcagacgagctctcaagcccagaagca
gagtcctcaggtgaaactgacggccaagtagctgtggatccagcgccgagcgtcgaagtg
gttccttcagaggatgaatctaaaacagagacagaattaacggtggtggacccagcagag
gtgatcccgcctgcccggaagatgtctaacgccgatctgtcggatgtcccgctcgtcccg
accaaccccatcgccgtggtcaagaactcgatcaagctgagactcagcaggtag
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