Carassius gibelio (silver crucian carp): 127983892
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Entry
127983892 CDS
T08819
Name
(RefSeq) collagen alpha-1(X) chain
KO
K19479
collagen type X alpha
Organism
cgib
Carassius gibelio (silver crucian carp)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
127983892
NCBI-ProteinID:
XP_052442231
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Position
B20:complement(27146463..27150891)
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AA seq
659 aa
AA seq
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MDLRVTSILLLLVVLAEATPDRYYHVKKQPYPVKSHTVAGEPGIPGSPGEPGPPGPPGSP
GIPGKSGIGHPGPSGPPGPPGPAGFSSPGKPGSPGSPGKPGAPGIPGEKGHPGPAGPQGA
RGAPGSAGSPGPAGISSSGKPGPHGLPGAMGPRGEPGLKGHPGIPGEPGQKGEPGHGIPG
APGGTGPMGPQGPPGQPGQHGIGKPGPNGFPGEPGKPGMPGRDGSPGPMGIAGPKGHTGA
PGVGAPGKPGQNGAPGLPGSMGQKGPQGPAGQPGAPGLPGVGKPGSHGPPGDRGVPGSPG
TTGQKGEPGPMGHTGLTGAIGPIGPPGPQGARGFQGEAGPQGAKGDIGLVGAPGQRGAKG
EQGAQGFSGKPGVPGTAGPAGPMGHMGHQGPKGEPGFTGAPGIPGTKGPPGEKGHTGLQG
PQGARGENGVPGSRGPTGPVGPAGPPGLKGHPGHPGPPGPAGLTAKGISGPQGPPGIPGA
RGHDGLPGPQGPPGPPGPPGEMIYHDHKKDSYPSHEWAMPVSHDLMKAPMSAFTALLTTA
YPNAGTPIVFNQVVYNGENHYDPSTGKFTCQVPGLYFFSFHMHVNGANALVALYKNGEPV
LFSYDEYNKGFLDQMSGSTVLMLNSQDEVFIQAPDDQSNGIYADDNVHCSFSGFLIAST
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggaccttcgggtaacaagcattcttctccttcttgtggtactggctgaggcgacccct
gacagatactatcatgtgaagaaacagccttatcctgtaaaatctcacaccgttgctgga
gaacctggtattccaggttccccaggtgaacctggcccccccggcccacctggctcacca
ggaattccaggaaagagcggcattggacaccctggtccatctggtccacctggaccacca
ggtccagcaggcttctcttcacctggtaaacctggaagtccaggttcacctggaaaacca
ggcgcaccaggaattccaggcgagaaaggacatccagggcctgcaggacctcaaggtgca
agaggagcaccaggatcagctggaagccctggacctgctggcatttcttcttctggaaag
cctggaccacacggtcttccaggagcaatgggcccacgtggagaacctggcctaaagggt
catcctggaattcctggagagccaggccagaaaggagaacctggccatggtattccagga
gcacctggtggcacaggtccaatgggccctcaggggcctcctggtcagccaggtcagcat
ggaattggaaaacctggaccaaatggatttcctggagagcctggaaagccaggaatgcca
ggtagggatgggtcaccgggtcctatgggcatagcaggcccaaagggtcatacaggggca
cctggagtaggagcaccaggtaaaccaggccaaaatggcgctccaggtttgcctggatca
atgggacaaaaaggccctcaaggaccagcaggacagccaggcgctccaggtctgccaggt
gttggcaaacctggatcacatggacccccaggagatcggggagtgcccggatcaccaggt
acaacaggccaaaagggagaaccagggccaatgggtcacacaggtctgacaggtgctatt
ggcccaataggtccacctggtccacagggtgctaggggattccagggagaagcaggtcca
cagggagctaaaggtgacattggtctggttggcgcaccagggcaaaggggtgcaaagggt
gagcaaggtgcacaaggcttctcaggaaaacctggtgttccaggcacagcaggtccagca
ggtcctatgggtcatatggggcatcagggtcccaagggcgaaccaggatttactggtgca
ccaggtatcccaggtaccaaggggccaccaggagaaaagggacatacaggtcttcaaggg
ccacaaggtgcaaggggtgaaaatggtgttcctggatcaagaggaccaacaggcccagta
ggacctgctggtccaccagggcttaagggtcatccaggacatccaggtccccctggtcca
gcggggctcacagccaagggaatttctggacctcagggtcctcctggtatccctggtgcc
agaggtcatgatggtctcccaggtccacaaggacctcctggccctcctggacccccaggc
gagatgatttatcacgatcataaaaaggattcatatccatcccatgagtgggcaatgcca
gttagtcacgatttaatgaaggcacccatgtcagcattcacagcgcttcttaccacagct
tatcctaatgctggaacaccaattgtattcaaccaggttgtttacaatggagagaaccac
tatgatcccagcactggcaaattcacctgtcaggttccaggactttacttcttttctttc
catatgcatgtcaatggtgcaaatgcattggtagcactttacaaaaatggagaaccagtc
ctgttctcttatgatgagtacaacaaaggtttccttgaccagatgtctggcagtactgtc
ctcatgctgaattctcaagacgaagtgttcatccaggctccagatgaccagtccaatggc
atttatgctgatgataatgttcactgttctttctctggcttcttgattgcctcaacgtga
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