Carassius gibelio (silver crucian carp): 127983898
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Entry
127983898 CDS
T08819
Name
(RefSeq) retinoic acid receptor RXR-gamma-B isoform X1
KO
K08526
retinoid X receptor gamma
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03320
PPAR signaling pathway
cgib04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
127983898
03320 PPAR signaling pathway
127983898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127983898
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cgib03310
]
127983898
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
127983898
Nuclear receptors [BR:
cgib03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
127983898
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
Motif
Other DBs
NCBI-GeneID:
127983898
NCBI-ProteinID:
XP_052442243
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All DBs
Position
B20:complement(9424330..9444955)
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AA seq
465 aa
AA seq
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MWHPAALPLQGQSHDREGGHYSHYTSALNSPHSQPPPLSPMVGHPSVISSSRPLQSPMNT
LASSMNGLASPYSVICPSLGSPSISLPSTPSMGFNTLSSPQMNCLNVTSSEDIKPPPGLA
PLSNMSSYQCSSPGSLSKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRDS
KECLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKEKGDNEVESTSSFNEDMPVDK
ILDAELAVEPKTETYTENSPVNSTNDPVTNICHAADKQLFTLVEWAKRIPHFSDLPLDDQ
VILLRAGWNELLIASFSHRSITVKDGILLGTGLHVHRSSAHSAGVGSIFNRVLTELVSKM
KDMQMDKTELGCLRTIVLFNPDAKGLSNPAEVEALREKVYASLETYTKQKYPDQPGRFAK
LLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQIT
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgtggcatccggcggcgttgcctcttcagggtcagagtcacgacagagagggtggtcac
tacagccactacactagtgctcttaattcaccccactctcaaccaccacccctgagcccc
atggtgggtcatccgtctgtcatcagttcgtcccgccctctgcagtcgcccatgaacacc
ctggcctcatccatgaatggcctagcctcaccctactcggtcatctgcccttctctgggt
tcaccatcaatttccttgccctctactcccagtatgggctttaacaccctcagcagccca
cagatgaactgtttaaatgtgacaagctcagaagacatcaagcctccaccaggattggct
ccgctgagcaacatgagcagctatcagtgcagcagccctggatcgctctccaaacacatc
tgtgccatttgtggggaccgatcttcaggaaagcactatggtgtttacagctgtgaaggt
tgcaaaggcttctttaagaggaccatcagaaaagacctgacctacacgtgtcgagacagc
aaagagtgcctgatagacaaacgccagcgcaatcgctgccaatattgccgctaccagaag
tgcctggccatgggcatgaagcgggaagcagtccaggaagagaggcagcgtgggaaggag
aaaggtgataatgaggtggaatcaaccagcagctttaatgaagacatgcctgtggataag
attctggatgcagaactcgcagtagaacctaagactgagacatacacagagaacagtcca
gtcaactcaactaatgacccagtcactaatatctgccatgcagctgacaaacaactgttt
actctggtggagtgggccaagaggatacctcatttctctgatctgcctttggatgatcag
gttattttgcttcgagcaggatggaatgaactcctcattgcttcattctctcatcgctca
atcacagttaaagatggcatcttgctgggcacaggcctccatgtccacaggagcagtgct
cacagtgcaggtgtcggctccatttttaacagggtattgacagagctggtatctaaaatg
aaggatatgcagatggataagacagaactaggctgccttagaaccattgtcctcttcaac
cctgacgccaaaggcttgtctaacccagcggaggtagaggcactgagggagaaagtttac
gcctcactggagacctacactaaacagaaataccctgaccagcctggcaggtttgctaaa
cttttgttgcgtcttcctgccctccgatccatcggactcaagtgtttggagcacctattt
ttcttcaagctgattggagacacacccatagacactttcctaatggagatgctggaagca
ccccatcagatcacgtga
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