Carassius gibelio (silver crucian carp): 127983900
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Entry
127983900 CDS
T08819
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U-like isoform X1
KO
K12888
heterogeneous nuclear ribonucleoprotein U
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127983900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgib03041
]
127983900
Spliceosome [BR:
cgib03041
]
Common components
Common spliceosomal components
hnRNP proteins
127983900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_33
SPRY
SAP
SAP_new25
AAA_18
Motif
Other DBs
NCBI-GeneID:
127983900
NCBI-ProteinID:
XP_052442248
LinkDB
All DBs
Position
B20:complement(8791658..8799385)
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AA seq
779 aa
AA seq
DB search
MSEINVKKLKVNELKDELKKRNLSDKGLKAELMERLQAALDSEALAEEEEAVEEATDENE
AEGNGVAVEQKVMGEEEPEGESMEAEEQNGDGGDGQDDEMGKEEEDGDAGVEMDKALDEE
EEEEEEDEDDEIIDKIDDEDGEPESHPLEGDADKDISADQKNKKGVKRRREEHGRGYFEF
IEESKYSRSKSPLPPLDEEDEEFDDTLACLDPYNCDLNFKVSRDRYSASSLTMESFAYLW
AGGRASYGVNKGKACFEMKITEKIPVKHLNSKNVDFHDVHVGWSLANGSLLLGEGEHSYS
YSSKGKKTSNFVTEDYGENFDENDVIGCFINFEADELEISYSKNGKDLGVAFKVNKESFA
GQTLFPHVLCHNCAVEFNFGQRETPFFPQVEGFTFLQQIPVDVRIRGPKGPETKKDCEVI
VMVGLPGSGKTAWVNKHVEENPGKFNVLGTNAILEKMMIDSMKRQNKDTAKLSAISQRAP
LFLGKFIEIAARKKRNYILDQTNVSALAQRRKMCLFAGFQRKAVVVFPADEAFKERTQKK
AETDGKDVPEHAVLKMKGIYTFPEVGDCFSEVTYVELQKEEAVKLLEQYKEESKSALPPE
KKPNQGTITPKKGGGRGKGPKNQFSRGGGPGPRGGRGGFQPRGNFRGLPAPHRGFNRHPR
GYMPPPPPPPVFRGGFHSRGGAGGMPSRGMGPRGGGHIRGGRGGAMGRGGAAHRGNMHRG
GPQNRGHFQQKFRGRGGHQQNRGGFGNKNGSFAQAFNQSWQQGFWNQKPWNQQYHPGYY
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaatcaacgtcaaaaagcttaaggtgaacgagttgaaggacgagctcaagaag
cgaaatctctccgacaagggattgaaggccgagctcatggagcggctgcaggccgcgctc
gattctgaggccctggctgaggaggaagaagccgtggaagaagcaacagacgaaaacgag
gccgagggaaacggtgttgcggtcgaacaaaaagtcatgggtgaagaagagccggaggga
gagagcatggaggccgaggagcaaaatggagacgggggtgatggccaggacgacgaaatg
ggcaaagaggaggaggatggggacgccggcgtggaaatggacaaagcccttgatgaagaa
gaagaagaggaggaggaggacgaagacgacgagatcatagacaaaatcgacgacgaagat
ggtgagcctgaatctcatccattagagggggatgcggacaaagacatcagtgctgatcag
aagaataagaagggtgttaagagacgccgggaggaacatggaaggggctactttgaattt
attgaagaaagcaaatacagccggtctaagtctcctctgccacctcttgatgaagaagat
gaagagtttgacgacaccttggcctgcctggatccatacaattgtgatctcaatttcaaa
gtctcccgggacaggtatagcgcctcatctcttaccatggagagtttcgcttacctttgg
gcaggtggccgtgcctcatacggtgtaaacaaaggcaaagcctgctttgaaatgaagatc
actgagaaaatcccggtcaagcatttaaacagcaaaaacgtggacttccatgatgtccat
gttggctggtccctggcaaatggaagtcttttgctgggtgagggggagcattcctactcg
tattcaagcaaagggaagaagacttcaaattttgtgactgaagactatggggagaatttt
gatgaaaatgatgtcatcggctgcttcattaattttgaagcagatgagctggagatttcc
tactccaaaaatggaaaggaccttggtgtggctttcaaggtcaataaggaatcatttgcc
gggcagactctgttcccccatgttctttgccacaactgtgcggttgagttcaatttcggt
cagagggagaccccattcttccctcaggtggagggcttcaccttcctgcagcaaattcct
gtggatgtgcgtattagaggacctaagggacctgagaccaagaaagattgcgaggtgatc
gttatggtcggccttcctggatctggaaaaactgcttgggtaaataaacatgttgaagag
aaccctggcaagttcaatgtcctcggcaccaacgccatcttggagaagatgatgattgac
agcatgaagaggcaaaacaaagacacggcgaagctctcagccatctctcagcgtgcacct
ctgttcctgggcaagtttattgaaattgccgcccgcaaaaagagaaactacatcttggat
cagacaaacgtgtctgcactggcccagagaaggaagatgtgtctgtttgctggcttccaa
cgcaaagctgtagtggtcttcccagcagatgaggccttcaaggagagaacacagaagaaa
gcagaaaccgatggcaaagatgtacctgagcatgccgttctgaaaatgaaaggtatctac
acatttccagaggtaggagactgcttctcagaggtcacctatgtggaactgcagaaggag
gaagccgtcaagcttttggagcagtacaaggaagagagtaaaagtgctttgccacccgaa
aagaaaccaaaccagggcacaataacccccaaaaagggaggtggacgaggcaaagggcct
aagaaccagttcagtaggggtggtggtccaggcccacgtggaggcagaggtggatttcag
ccccgtggaaacttcagaggattaccagcaccacatcgagggtttaatcgtcacccacgt
ggctacatgccaccaccgccaccaccccctgtcttcagaggagggttccatagccgaggt
ggagccggtgggatgcccagccggggaatgggccccaggggtggtgggcacattagaggc
ggcagaggtggagcaatgggccgtgggggggctgcacacagaggtaacatgcaccgcggt
ggaccccaaaacagaggacacttccagcagaagttccgtggcagaggaggccatcagcag
aatcgtggtggttttggcaataaaaacggatcttttgcccaagccttcaaccagagctgg
caacaagggttctggaaccagaagccatggaatcaacagtaccacccaggatattactaa
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