Carassius gibelio (silver crucian carp): 127983962
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Entry
127983962 CDS
T08819
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127983962
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
127983962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
DUF494
HTH_37
HTH_26
HTH_31
Motif
Other DBs
NCBI-GeneID:
127983962
NCBI-ProteinID:
XP_052442366
LinkDB
All DBs
Position
B20:2944153..2957557
Genome browser
AA seq
462 aa
AA seq
DB search
MSHYTDEPRFTIEQIDLLQRLRRTGMTKPEIVHALDTLERLDREHGDKFGRRGPLDSNAT
NSTTSSTTPTSNNTSNAIMASSSTTSTSTQTQFHGNLSPSPSNSYATSPPAVLPSPVSLV
AMAQNGRDALAATPNGKLSPNRYPVNSAAAVRSYGLDGSEEDLDIDDKVEELMRRDSTLV
KEEIKAFLGNRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTTPG
ATLNMRPTPVSLDEMEWRQTPPPISSAPGSFRLRRGSRFTWRKECLAVMESYFSDNQYPD
EAKREEIANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIGSFFQEATIL
ESHGIDVQSPGGHSNSDDIDANDYNEQGCDVTYFEKRGVNRPFGYYRLEPTSPTQDDAGN
HADHQDPISLAVEMAAVNHSILALSRPGGVASEIKTESLDDD
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtctcactacacagatgagccacgcttcactatcgaacagatcgacctgctgcagaga
ctgcggcgtacaggtatgaccaaacccgagatcgtgcacgcgctggacaccctggagcgg
ctcgaccgcgagcacggggacaagttcggccggcgcggcccgttggactccaacgccacc
aacagcaccacctccagcactacacccacctcaaataacactagcaacgccatcatggcg
tcctcctccaccacctccacatcaacgcaaacgcagttccacggtaatttatcgccatcg
cccagcaacagttacgccacgtctccacctgccgtcttaccttcgccggtctcgctggtc
gcaatggcgcagaatgggcgggacgctttggcggcgacgcccaatgggaagctgtcgcca
aaccgttacccagtgaacagtgcggcggcggtgagatcgtacgggctggatggctcagag
gaggacctggatatagatgacaaggtggaggagctcatgaggcgggacagcaccctggtg
aaggaggaaatcaaagcctttctgggcaacagacgtatctcacaagccgtggtggctcag
gtcacaggcatcagtcagagcagaatctctcactggcttctccagcagggctcagatctc
agcgaacagaagaaacgagctttctatcgctggtaccagctggagaagacaacgccaggt
gccacattaaatatgcggcccacccctgtatctctggatgagatggagtggcgccagact
ccgccccccataagctccgcccccggaagcttccgtctgcgccgaggcagtcgattcacc
tggaggaaggaatgtctcgctgtgatggagagctatttcagtgataatcaatatccagat
gaagccaaacgagaagaaatcgcgaatgcctgcaacgctgttattcagaagccaggaaag
aagttgtctgacttggaaagagtcacatcattgaaagtctacaactggtttgccaaccgg
cgcaaagagatcaagaggagggccaatattgggtcttttttccaagaagccacaatcttg
gagagtcacgggatcgatgtacagagtcctggaggacactccaacagtgacgacatcgat
gctaacgactacaacgagcagggttgtgatgttacctattttgaaaagagaggtgtgaac
agaccctttggttactaccgtctggagcccacctcaccaacacaggatgatgccggcaat
cacgcagaccaccaggaccccatctctctcgccgtggagatggcagctgtcaatcacagc
atcctcgccctgtcccgtccgggaggcgtggccagtgaaatcaagacagagtcactggat
gatgactga
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