Carassius gibelio (silver crucian carp): 127983969
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Entry
127983969 CDS
T08819
Name
(RefSeq) serine/arginine-rich splicing factor 5-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03040
Spliceosome
cgib05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127983969
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127983969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgib03041
]
127983969
Spliceosome [BR:
cgib03041
]
Common components
Common spliceosomal components
SR proteins
127983969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_occluded
RRM_5
SET_assoc
Motif
Other DBs
NCBI-GeneID:
127983969
NCBI-ProteinID:
XP_052442375
LinkDB
All DBs
Position
B20:11841122..11848544
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AA seq
280 aa
AA seq
DB search
MSGCRIFIGRLNPSAREKDVERFFKGYGKIRDIDLKRGFGFVEFDDPRDAEDAVYELDGK
ELCNERVTIEHARVRLRGGRGRGGSGGRFPGRYARGSQDSRRNKSVTRSVSPVRNPPPMR
TENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASHSDLKNALEKLS
GKEINGRKIKLVEATRKKSRTRSRSNSSSRSRSRGRSTSRSRSRSHSHSPKSHNRSRSRS
RLASASPVRPKEAPRAESASPPPPAQRPPPSRSPSADSRH
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgagcggctgtcgtattttcatcggtcgattgaacccctctgctcgagagaaggacgtc
gagcggttcttcaagggttatggaaaaatcagggacattgacctgaaaagaggcttcgga
tttgtagaatttgatgatccgagagatgcagaagatgctgtttatgagcttgatggaaaa
gagctctgcaatgaaagggtgaccattgaacatgcccgtgtccgtctgcgtgggggccgg
ggccgcggaggcagtggaggacgttttcccgggcggtatgctcgtggctcccaggacagc
cggagaaataagtcagtgactcgaagtgtttcgcctgtcaggaatcctccaccaatgcgc
acagagaatcggctcattgtggagaatttgtcatcaagagtcagctggcaggatttgaag
gatttcatgagacaagctggagaagttacttttgcagatgcccatcggccaaagcttaat
gagggtgtggttgagtttgcttctcatagtgatctaaaaaatgccctggagaagttgtct
gggaaggagatcaatggaaggaaaatcaaacttgtcgaggcaaccaggaaaaaatccaga
actcggtctcgttcaaatagttcctcccgttctcgttcccgagggcgctccacatcacgt
tctcgtagccgctcacattcccatagccccaaatcacataaccgctccagaagtcggtcc
cgtttggccagtgcttctcctgtgcggcccaaagaagcaccacgtgctgaatccgcatca
ccgccgcccccagcacagcgccccccaccgtcccgttccccatctgctgacagtcgtcat
tag
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