KEGG   Carassius gibelio (silver crucian carp): 127984016
Entry
127984016         CDS       T08819                                 
Name
(RefSeq) pre-mRNA-processing factor 17
  KO
K12816  pre-mRNA-processing factor 17
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127984016
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cgib03041]
    127984016
Spliceosome [BR:cgib03041]
 Complex C
  Other components
   Step II factors
    127984016
SSDB
Motif
Pfam: WD40 WD40_Prp19 EIF3I WDR55 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 ANAPC4_WD40 Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_WDR75_1st Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_NWD2_C WD_LRWD1 Beta-prop_Vps41
Other DBs
NCBI-GeneID: 127984016
NCBI-ProteinID: XP_052442428
LinkDB
Position
B20:complement(1420907..1434522)
AA seq 578 aa
MAAAAASLVSYGSDSDSENESKSGTSPEKVDPDALAHLQPLKSGSVTSIAVLNSAPEVAV
KEDVMTGVHLDPALKEVTYNPSYETMFAPEFGPANPFRSQQMAAPRNMLSGYAEPAHVND
FMFEQQRRTFSTFGYALDPSVDTSQVSSSSYIGAVEEAEKNKGLMAFETGVKKSEKRKKV
KGGDASDIESFLGPWAKYQDERDVAKPSEDEKKELDEILAKRQKRGKNEEEAPAEEKTIL
HIKDAYDYQGRSYLHVPQDVGINLRSADVPDKCYLPKKQLHVWTGHTKGVSAIRLFPRSG
HLLLSCSMDCKIKLWEVYNDRRCARTFIGHSKAVRDVCFNNTGTQFLSAAYDRYLKLWDS
ETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEVVQEYDRHLGAV
NTITFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSM
DNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVVSGDADGKLNIWDWKTTK
LYHRIKAHDKVCISALWHPHETSKVITCGWDGQIKLWD
NT seq 1737 nt   +upstreamnt  +downstreamnt
atggcggcggcggcagcttccctcgtttcttacggcagcgactcagattcggaaaacgag
tctaaatccggtacaagtccggagaaagtcgacccagacgcgctagctcatctccagccg
ttaaaatctggcagtgtaacgtccatagccgtgctgaattccgcgcccgaggtcgccgtt
aaggaagatgttatgaccggggttcatctcgatccagcgctcaaagaagtcacgtataac
ccctcgtatgaaaccatgtttgctcccgagtttggaccagcgaacccgttcagatcgcag
cagatggcggcgccgaggaacatgctgtctggttacgccgaaccggcgcacgtcaacgac
ttcatgtttgagcaacagaggagaaccttctcgacattcgggtacgctctggacccgtct
gtggacaccagtcaggtctcgtccagcagctacatcggagccgtggaggaagcagagaag
aacaaaggtctgatggcgtttgagacgggggtcaagaagtcagagaagaggaagaaggtg
aaaggtggagacgcttcggacatcgagagcttcctcggaccctgggccaaataccaggat
gagagagacgtggccaaaccctccgaggacgagaagaaagagctggacgagatcctggcc
aagagacagaagagaggcaagaatgaagaagaggctccagcggaggagaagaccatcctg
cacattaaagatgcgtacgattaccagggccgctcgtacctgcacgttcctcaggacgtg
ggcatcaacctgcgctcagcagacgtcccggacaaatgctacctgcccaagaaacagctg
cacgtctggaccggacacaccaagggggtcagtgccatccgtctgttcccgcggtctggt
catctcctgctctcctgctccatggactgtaagatcaagttgtgggaggtgtataatgac
aggagatgtgcacggacctttattggtcacagtaaagccgtgcgtgacgtgtgcttcaac
aacactggcacacagttcctgagcgccgcctacgaccgatatctgaagctctgggactcg
gagacgggtcagtgcatctcacgcttcaccaacaggaaggttccctactgcgtcaagttc
aacccggacgaggacaaacagaacctgtttgttgctgggatgtcggacaagaagatcgtc
cagtgggacatccgctccggtgaggtggttcaggagtacgacagacacctcggcgccgtt
aacaccatcacattcgtggacgagaaccgccgcttcgtcagcacctcggacgacaagagc
ctgcgcgtctgggagtgggatattcctgtggacttcaagtacatcgctgagcccagtatg
cactcgatgcctgcggtcacgctctcgcccaacgggaagtggctggcgtgtcagtccatg
gacaatcagatcctgatcttcggagcgcagaacagattccggctcaacaagaagaagatc
ttcaagggtcacatggtggcgggatacgcctgtcaggtggacttctctccggacatgagt
tacgtggtttccggcgacgctgacgggaagctgaatatctgggactggaagacgacgaag
ctgtatcaccgcatcaaggctcatgataaggtgtgcatcagcgcgctctggcatcctcac
gagacgtcgaaagtgatcacctgcggctgggacggacagatcaagctctgggactga

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