Carassius gibelio (silver crucian carp): 127984026
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Entry
127984026 CDS
T08819
Name
(RefSeq) interferon regulatory factor 4-like
KO
K09445
interferon regulatory factor 4
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127984026
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
127984026
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
IRF
IRF-3
Motif
Other DBs
NCBI-GeneID:
127984026
NCBI-ProteinID:
XP_052442443
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Position
B20:complement(1626816..1633906)
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AA seq
422 aa
AA seq
DB search
MSGSSGNGKLRQWLIEQVDTGKYPGLVWEDRERTVFRIPWKHAGKQDYNRDEDPALFKAW
ALFKGKYREGIDKPDPPTWKTRLRCALNKSSDFEEMVGRSQLDVSEPFKVYRVIPEGTKR
APKSYENVSSSSGHHNYPFYPSHEPVEGQVCNFLSAADRSWRDFLCEQNSLSDVHFSHNS
CWDAGYQRSGSFYSCNTFESHPSPFTLDASMKSAEAMALSDARLQVTVFSGETPVTDVTV
MSSEGCRLAPHDDNWTYSGPGGPELIPLPQAERGALEGGVLVWMTPDGLYARRFCQCRVY
CDGPHANLSVKLCKLEREQTSKLLDTQLFLTELQGYFLHARPPPHFHVQLFFECCDPSAD
KRPLMVQVEPLFARQLLLLLQQGGINYSRNSHELSPPTSEQVYPAHQDYPVVSGHEAHGN
FV
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaagctctgggaacgggaagttgcgtcagtggctgatcgagcaggtggacact
gggaaataccccggcttagtttgggaggaccgggagcggaccgtcttccgcatcccgtgg
aaacacgcagggaagcaggactacaacagagacgaggaccccgctctcttcaaggcctgg
gctctgtttaagggcaagtatcgcgagggaatagataaaccggatcctcccacctggaaa
acccggctcaggtgtgccttgaacaagagcagcgacttcgaagagatggtgggccgaagt
cagctggacgtatcagaaccgtttaaagtttaccgcgttattcctgaaggaaccaaaaga
gcaccaaaatcatatgagaatgtttcctcaagctcgggtcaccataactatccgttttat
ccttcacatgaacctgtggagggtcaggtgtgtaacttcctgtctgctgctgacaggagc
tggagggacttcctgtgtgagcagaactctctgtctgacgtccacttcagccataactca
tgctgggatgccggttaccagagaagtggctctttctacagctgtaacacgtttgagtcg
catccctctccgttcactctggacgccagcatgaaatcagccgaggccatggcactgtca
gacgcccgtctgcaggtgacggtgttcagcggtgagactccggtcacagacgtcaccgtc
atgagctccgagggctgtcggctggctccgcatgatgataactggacctacagcggtccg
ggcggcccggagctgattcctctcccccaggctgagagaggagcgctggaggggggcgtc
ctggtctggatgacgcccgacggactgtacgcccgacgcttctgtcagtgcagggtctac
tgcgacgggccgcatgctaacctgagcgtcaaactctgcaaactagagcgagagcagacc
agcaaactactggacacacagctcttcctgacagagcttcagggttatttcctgcatgct
cgtcctcctccgcatttccacgtgcagctgttttttgagtgctgtgacccctctgcagac
aagagacccctgatggtccaggtggagccactgttcgcccgtcagctgttgctcctcctc
cagcagggcggcattaactactcaaggaactcccatgaactttcacctccgacctctgag
caggtttaccccgcccaccaagattatcctgttgtcagcggacatgaggcacacggcaac
ttcgtataa
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