Carassius gibelio (silver crucian carp): 127984184
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Entry
127984184 CDS
T08819
Name
(RefSeq) pre-mRNA-processing factor 39-like isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgib03041
]
127984184
Spliceosome [BR:
cgib03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
127984184
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_15
TPR_19
ARM_TT21_2nd
Motif
Other DBs
NCBI-GeneID:
127984184
NCBI-ProteinID:
XP_052442664
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All DBs
Position
B20:833763..840737
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AA seq
737 aa
AA seq
DB search
MEDSGEPMTGMLDTNAPDNGDAPAMEGTDPTATGWTAPPQAPIQQPSALEQYQLYSMEHL
KSAAENIDHTSGPPDAGAESLGQQTDTNGQQDEVKPAADGDSESPSNMELEDAPKETTEA
VEPAADADPAVTQEPALPADYERLFKVVEDNPEDFNGWVYLLQYVEQENHLEASRKAFDA
FFLHYPYCYGYWKKYADIERKHGYIHMADEVYRRGLQAIPLSVDLWLHYITFLRENQDTS
DGEAENRIRASYEHAVLACGTDFRSDRLWEAYIAWETEQGKLANVTAVYDRILCIPTQLY
SQHFQKFKEHVQSNNPKHFLSEEEFVQLRVELANANKPNGDDAPGEELPPGTDDLPDPAK
RVTEIENMRHKVIETRQEVFNHNEHEVSKRWAFEEGIKRPYFHVKALEKTQLNNWREYLD
FELENGTPERVVVLFERCLIACALYEEFWIKYAKYLESYSVEGVRHIFKKACTIHLPKKP
TVHLLWAAFEEQQGGVEEARRILREMEEAVPGLATVRMRRVSLERRHGHMEEAEALLTDA
ISNGKNSSEASFYAVKLARQLLKVQKSIGKAKKVLLDAVEKDETNPKLYLNLLELELSGD
VQQNETEILACFDRALTSSMSLEQRVIFSQRKLDFLEDFGSDINVLVSAYEHHQRLEAEQ
ESLKRKAENGSEEPDSKRQRTDDQSAASGQMMQDMQANHAGYNYNNWYPQYNSWGQNSWG
QYGQYGQYNQYYPPPPT
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggaagactctggtgagcccatgaccgggatgttggacacgaatgcccctgataacggg
gacgctcctgctatggagggcactgacccgaccgcgaccggctggacggctcctccacag
gctccgatccagcagccgtctgctttagaacaataccagctgtactccatggagcatctg
aagtctgcagcggagaacatcgaccacacgtccggtcctccagacgccggagcggagagc
ctcgggcagcagacggacacaaacggacagcaggacgaggtgaagccggccgcagacggt
gactccgagagcccttccaacatggagctggaagacgctcccaaagaaaccacagaagcg
gtggaaccggcggcagacgcagatccagccgtcacacaagaacctgcgcttcctgcagat
tacgagcggctctttaaagttgtggaggataatcctgaagacttcaacggctgggtctac
cttctgcagtatgttgagcaggagaaccacctggaggcttcgaggaaggcgtttgatgcc
tttttcctgcactacccctactgttacggctactggaagaagtatgcagatattgagagg
aaacacggctacatacacatggccgatgaggtgtaccgtcgaggtctgcaggctattcct
ctcagcgtggacctgtggctgcattatatcactttcctgcgagagaaccaagacactagc
gacggagaggcggaaaatcgcatcagagcgtcctatgagcacgccgttctggcctgcggc
acagatttccgctccgaccgtctgtgggaggcgtacatcgcttgggagacggagcagggg
aagctggccaacgtcacggccgtgtacgaccgcatcctgtgtattcccacgcagctgtac
tcccagcacttccagaagttcaaagagcacgtccagagcaacaaccccaagcacttcctg
tctgaggaggagttcgtgcagctgcgggtggagctggctaacgctaacaagcccaacgga
gacgacgctccgggagaagagcttcctccgggaacagacgacctgccggatccagccaag
agagtgacggagatcgagaacatgaggcataaggtgatcgagacccgccaggaagtgttc
aaccacaacgagcacgaagtcagcaagcgctgggccttcgaggaagggatcaagcgtccg
tacttccacgtcaaggccttggagaagacgcagctgaacaactggagggagtacctggac
ttcgagctggagaacgggacgccggagcgtgtggtggttctgttcgagcgctgtctgatc
gcctgcgctctctacgaggagttctggatcaagtacgccaagtatctggagagctacagc
gtggaaggcgtccggcacatcttcaagaaggcctgcaccatccacctgcccaagaaaccc
accgtgcacctgctctgggccgcgtttgaggagcagcaaggcggcgtggaggaggcgcgg
cggatcctgagggagatggaggaggctgttcctggtctggcgacggtgaggatgaggagg
gtgagtctggagcgccggcacggacacatggaggaagcagaagccctgctgacggatgcc
atctccaacgggaagaacagcagcgaggcgtccttctacgctgtgaaactggcccgacag
ctgctcaaagtgcagaagagcatcgggaaggccaagaaagtgctgctggacgccgtcgag
aaggatgagacgaacccgaagctgtacctgaacctgctggagctggagttgagcggcgac
gtgcagcagaacgagacggagatcctggcctgcttcgaccgagcgctgaccagcagcatg
tccctggagcagcgcgtcatcttctcccagcgcaagctcgacttcctggaggacttcggc
agcgatatcaacgtgctggtgtcggcgtatgaacatcatcagagactcgaggcggagcag
gagtcactgaagaggaaagcagagaacggctcagaggagccggactcaaagagacagcgg
acggacgaccaatcagcagcctcgggtcagatgatgcaggacatgcaggccaatcacgct
ggatacaactacaacaactggtacccgcagtataactcgtggggtcagaactcctggggt
cagtatggtcagtacggtcagtataaccagtactacccaccgcctccaacataa
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