Carassius gibelio (silver crucian carp): 127984263
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Entry
127984263 CDS
T08819
Name
(RefSeq) platelet-derived growth factor receptor alpha
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04010
MAPK signaling pathway
cgib04020
Calcium signaling pathway
cgib04144
Endocytosis
cgib04510
Focal adhesion
cgib04540
Gap junction
cgib04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127984263
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cgib01001
]
127984263
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cgib04090
]
127984263
Enzymes [BR:
cgib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
127984263
Protein kinases [BR:
cgib01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
127984263
CD molecules [BR:
cgib04090
]
Proteins
127984263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
VEGFR1-3_N_Ig-like
V-set
VEGFR-1-like_Ig-like
Ig_5
Kinase-like
Motif
Other DBs
NCBI-GeneID:
127984263
NCBI-ProteinID:
XP_052442784
LinkDB
All DBs
Position
B20:15175679..15199781
Genome browser
AA seq
1463 aa
AA seq
DB search
MGFVETHLVFGIVLLGIFLDVSKPFPVINSDQKEFILTPHSEFTITCSGERTVTWVEPLP
PNSEVQSGFNHSTLMIADADASNTGYYTCSYEDQPEKDTDIYIFVQDPEVPFVSESTVET
DEMGTTIPCRATNPHSQVILRNLQSGVEVSVLYDHKLGFFGVITPGHYVCETSVNGKAVQ
SIVYNVTNDMDDDDDDDDGDVDEEKSFYIKLSASMEDVKEGDAVNLTCETSPGKAFHQQW
LHPQKQAGNAVSMKLTFPDKVQYILNIPKASVADTGLYECAVTNQLTDQTKSLSLGITVH
ESSFVEVISNGIGPVEVVSLLEEKEFTIYIDADPEPKVRWFKDDLPLDDSYISTKTTHLQ
GLRYENILVLRHPIEEDSGVYEIVASTGSMTSRFSFKLLVEAMYPELPQSVLAPVMWPQR
DSMEVSLHSTFRLTCRGQAELSWHGPVYLHDQFDSEKKGLFISTVTVGNATAAHTGKYIC
YYDSSNNTEETSIYIYVPDPETPFVQSMIPFENHVLTSHDEMEIPCRVTDPSAEVSLIHI
ESNQVLPSVYDSTRGFTGLFSSGTYVCRALTNGQTHDSIEYIVHGWTGGSDVEVELRAEK
KALLVGETITVDCVARNSEILEDHWKYPGKMAGRGVKTVKENKRDLEIHYTLTVTNASLK
DSGVYACSITDVKSNESQTKQLTITVYGQEFVHINPMTGPVETTRLDEVREFRVAIQSFP
APKVTWLKDGSVLGDVAAEIATSLLKIDETSYQGMLTLIRAKAEDSGNYTIRAETGSQTA
SNSFYLQVKVPPVIVDLVDIHHGSAAGQEVVCTAAGSPAPDVDFYICKNIKHCANDSSQW
MPLPINSTGITVKLQMEVDNNIESHIIFHHLESTIAVRCLARNDMGAVSREVKLVSNGPH
SELTVAAAVLVLLVIVIISLIVLVIIWKQKPRYEIRWRVIESVSPDGHEYIYVDPMQLPY
DSRWEFSRDSLVLGRVLGSGAFGKVVEGTAYGLSHSQPVMKVAVKMLKPTARSSEKQALM
SELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDGFLSRHTEKGK
KELDIFGINPADESSRSYVILSFEGKGDYMDMKQADTVQYVPMLEMSEASKYSPIQRSDY
DHPPSQRQFNESEVENLLSDDTTEGLTTMDLLSFTYQVARGMEFLASKNCVHRDLAARNV
LLSQGKIVKICDFGLARDIMHDNNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGIL
LWEIFSLGGTPYPGMVVDSSFYNKIKSGYRMAKPEHSSSDVYELMMKCWNSEPEKRPSFH
SLSETVASLLPSGYKRCYERVNRDFLKSDHPAVTRVQCVDNDDAYMGVLYKNQGKMKDRE
SGFDEQRLSSDSGYIIPLPDLDPLSHEDYSKRNRHSSQTSEESAIETGSSSSMTKREGET
LEDITLLDEMCLDSGDLVEDSFL
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atggggttcgtggagacacatctcgtttttgggattgtcttactagggatatttttagat
gtttcaaaaccgtttccagtaattaattcagatcaaaaggaatttattctcacacctcat
tctgagttcaccatcacttgctccggagagaggacagtgacatgggtcgagcctttacca
cccaacagtgaagtgcagtccggatttaatcacagtactttgatgatcgctgatgctgat
gcctctaacacaggatactacacctgcagttatgaggatcaacctgaaaaagacactgat
atctacatttttgttcaagatcctgaggttccattcgtgtctgaatctactgttgagaca
gatgagatgggcacaactatcccctgccgcgctacaaacccacattctcaagtgattctc
agaaacctgcagagtggagttgaagtttctgtgctttacgaccacaaactcggctttttt
ggtgtaataacacctggtcactatgtttgcgagacgagtgtgaatggcaaagcggtgcag
agcatcgtttataacgtgacaaatgacatggatgatgatgatgatgatgatgatggtgat
gttgatgaagagaagagcttctacataaagctgagtgccagtatggaggatgtgaaagag
ggggatgctgtcaatctgacctgtgagacgtctcctgggaaggctttccaccagcagtgg
ctgcatccccaaaaacaggccggaaatgctgtttcaatgaagttaactttcccggacaag
gttcagtacatcctcaacatcccgaaagcctctgtggcagacactggactctatgagtgt
gctgttaccaaccagctcactgatcaaaccaagtctctcagcctgggaatcacagtccac
gagagctcttttgtggaagtaatatctaatggcattgggccagtggaggttgtgtcgctt
ctggaggaaaaagagttcactatttacattgatgctgaccctgagccaaaggtcaggtgg
tttaaagatgaccttccgctggatgacagctacatctccaccaagaccactcatctacaa
ggcctcaggtatgagaatattctggttctccgtcaccccatagaggaagacagtggcgtc
tatgagattgttgcatccactggttccatgacttcaagattttctttcaaactgcttgtt
gaagctatgtacccagagctgccacagtcagtgctggctccagtcatgtggccccagagg
gacagcatggaggtgtctctccactccactttccgactcacgtgtcgcggtcaggccgag
ctctcctggcacggccctgtttatctccacgatcagttcgactctgaaaaaaaaggactc
ttcatctctactgtgactgttggcaatgcgacggccgcccatacaggaaaatacatctgc
tactatgactccagcaataacactgaggagacctccatctatatttatgtgccagatcca
gaaacgccatttgtgcagtccatgatcccttttgaaaaccatgtgctgacgagtcatgat
gaaatggagattccctgccgtgtgacggaccccagtgccgaagtctccctgattcacatc
gagtccaatcaggttctgcccagcgtctatgacagcacgagaggattcactggcctcttc
agctctgggacgtatgtctgcagggccctcactaacggacagacgcatgacagcatagag
tacattgttcatggctggacaggagggtctgatgtggaagtcgagctgcgagcagagaag
aaagctcttctggtgggtgagaccatcaccgttgactgtgtagccagaaacagtgagata
ctggaggaccactggaaataccctgggaaaatggcgggtcgaggagtaaagaccgtaaag
gagaataagcgcgatcttgagatccattatactctgacagtgactaatgcctcattaaaa
gacagcggcgtctatgcttgctccatcactgatgttaagagcaatgagagccaaaccaaa
caactcactattacagtctatggtcaagagtttgtgcacataaatccaatgactggtcca
gtggagactactaggctggacgaggtgcgagagttcagggtggccatacagtctttccct
gcccccaaagtcacatggttaaaggacggatcggtcttgggagatgttgctgcagagatc
gccaccagcctccttaaaatcgatgagaccagttaccaaggcatgttgaccctgatcagg
gctaaagcagaggacagtgggaactatactatcagggcagagacaggcagccagacagcc
agcaacagtttctaccttcaggttaaagttccccccgtgattgtggacctggtggatatc
caccacggctctgctgcaggtcaggaagtggtgtgtaccgctgctggctcccccgcccct
gatgtggacttttatatctgtaaaaacattaaacactgtgccaacgattcctcccagtgg
atgccacttccgatcaactctacgggcatcacagtcaaactgcaaatggaagtggacaac
aacattgagagtcacatcatcttccaccatcttgagagcacaattgctgtgcgctgtctg
gccaggaatgacatgggcgctgtgtcacgagaggttaaactcgtgtcaaatggtccgcac
tcggagctgactgtggctgctgctgttctggtgctgctggtcattgtcatcatctcactc
attgtgctggtcattatctggaaacagaaaccacgttatgagatcagatggcgtgtgatt
gaatcggtcagtccggacggtcacgagtacatctatgtggaccccatgcagcttccatat
gactctcgctgggagttctctcgggattcacttgtactgggtcgtgtcctgggctcaggt
gcatttgggaaagtggtggaaggcactgcttatggacttagtcattctcaacctgtgatg
aaagtggcagtgaaaatgcttaaaccgacagcgcgctccagtgagaaacaggctttgatg
tcagagctgaaaattatgacacacctgggccctcacctaaacattgtcaaccttctggga
gcgtgcaccaaatcaggaccaatctacattatcacggagtattgtttctatggagacctg
gtgaactacttgcataagaacagagatgggtttctcagccgccacacagaaaagggaaag
aaagagctagacatctttggcatcaacccagctgatgagagtagcaggagctatgtcatc
ctatcttttgaggggaaaggtgattatatggacatgaagcaggcagacaccgtgcagtac
gtcccaatgctggaaatgagtgaagcctcaaaatactcccccatccagagatcagactac
gaccaccctccctctcaaagacaattcaacgagagtgaagttgagaaccttctctcagat
gacaccactgaaggcctgacgacaatggacctcctcagtttcacctatcaggtggcacgt
gggatggagttcttggcctctaagaactgtgtacacagagacttggctgcacgtaatgtc
ctgctgtctcaaggcaagatagtgaagatctgtgactttggactggccagagacatcatg
catgataacaactacgtctccaaaggaagtactttccttccagtaaaatggatggcccct
gagagtatctttgataacttatacactacacttagtgacgtctggtcttatggcatctta
ttatgggagatcttctctcttggagggactccttatccaggtatggttgtggattccagc
ttctacaacaagatcaagagtggataccgaatggcgaaacctgagcattcatccagtgat
gtctatgaacttatgatgaagtgttggaacagtgaaccagagaagagaccgtctttccac
agcctgagtgaaacggtggcctctctgctgccttcaggatataagagatgctacgaacgt
gtgaatcgtgacttcctgaagagcgatcaccccgctgtgactcgggtgcagtgcgttgac
aatgatgatgcgtacatgggtgtgctctacaagaaccagggcaaaatgaaggaccgcgag
agcggctttgatgaacagagactcagctctgacagcggatacatcattcctctgccggac
ctcgacccgctgtcacatgaagactacagcaagaggaaccgccacagctctcagacgtcg
gaggaaagcgcaatagagacaggctccagcagctccatgacgaagcgtgagggagagacc
ctggaggacatcaccttgctggacgagatgtgcttggactcaggagacctggtggaggac
agtttcctgtga
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integrated database retrieval system
