Carassius gibelio (silver crucian carp): 127985358
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Entry
127985358 CDS
T08819
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04080
Neuroactive ligand-receptor interaction
cgib04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127985358
04082 Neuroactive ligand signaling
127985358
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgib04040
]
127985358
Ion channels [BR:
cgib04040
]
Ligand-gated channels
GABA-A
127985358
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
127985358
NCBI-ProteinID:
XP_052443299
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Position
B21:complement(5330426..5355506)
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AA seq
478 aa
AA seq
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MWASRRELRHMIKCGFILWRMMWGGRGAAWLWIWACLLVSSVLAGKSSSQSADEQKDNTT
VFTRILDSLLDGYDNRLRPGLGERVTEVKTDIFVTSIGPVSDHDMEYTIDVFFRQSWKDE
RLKFKGPMAVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIKEEGTLLYTMRL
TVRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYVWTRGAAQSVVVADDGSRLNQYDL
MGQTVDSGVVQSSTGEYVVMKTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVP
ARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKR
GYAWDGKSVVPEKQKKKKESLLKKNNTYTAATATTFAPNIARDPGLATIAKSAPPPPTEP
KEEPKPKAPEAKKTFNSVSKIDRIARIAFPLLFGTFNLVYWATYLNKKPKLQGAVQPH
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcatcacggagagagcttcgccatatgatcaagtgtggattcatcctttggaga
atgatgtggggtggaagaggagcagcttggctttggatttgggcctgtttactggtgtcc
agcgttctggctgggaaaagttccagtcaaagcgcagatgagcagaaagacaacaccaca
gttttcaccaggatcctggacagcctcctcgatggctacgacaaccgcctcaggcctggg
ctcggagagcgtgtaaccgaagtcaagactgacatcttcgtgacgagtattgggccggtc
tcagaccatgacatggagtacaccatcgatgtgttcttcaggcagagctggaaggacgag
aggctgaagttcaaaggtcccatggcagtgctccgtctcaacaatctcatggccagcaaa
atctggacgcccgacacgtttttccacaacggaaagaagtcagtcgcccataacatgacc
atgcctaacaaacttctgcggatcaaagaggaaggaacgctgctgtacaccatgaggctt
acagtcagagctgaatgtccaatgcatttggaggacttcccaatggatgcccatgcttgc
cctctcaaattcggcagctatgcctacacgagggctgaggtggtgtacgtttggacacga
ggggcggctcagtctgtggtcgtggctgacgatggctctaggctcaaccagtatgacttg
atgggacagacggtggactcaggtgtggtgcagtccagcacaggagagtatgttgtcatg
aaaacacatttccacctcaagaggaagatcggttactttgtcatccagacatatttgccg
tgcatcatgaccgtgatcctgtcccaggtgtccttctggctcaaccgggaatctgtcccc
gccagaactgtgtttggagtgaccactgtccttaccatgaccaccctgagtatcagcgcc
agaaactctctgcccaaggtggcctacgccacagccatggactggttcatcgccgtctgc
tacgcctttgtcttctcggctctcattgagtttgccactgtaaactacttcaccaagagg
gggtacgcctgggacgggaaaagtgtggtgccggaaaagcaaaagaagaagaaggagtca
ttgctgaaaaagaacaacacctacaccgctgcgacggcgacgacgtttgctccgaacatt
gccagagaccctggtttggcaactattgctaaaagtgccccccctccaccaaccgagccc
aaggaagagccgaaacccaaagcccccgaggccaagaagaccttcaacagcgtgagcaag
atcgacaggatcgccagaatagctttcccgctgctcttcggaacctttaacttggtgtat
tgggcaacttacttaaataaaaaacccaaattacagggcgccgtgcagccacactaa
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