Carassius gibelio (silver crucian carp): 127985414
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Entry
127985414 CDS
T08819
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04080
Neuroactive ligand-receptor interaction
cgib04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127985414
04082 Neuroactive ligand signaling
127985414
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgib04040
]
127985414
Ion channels [BR:
cgib04040
]
Ligand-gated channels
GABA-A
127985414
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
127985414
NCBI-ProteinID:
XP_052443380
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All DBs
Position
B21:complement(5374195..5396263)
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AA seq
436 aa
AA seq
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MTWIRSCFVLYFVGQVLANPPTETRVYLDNITRILDRLLDGYDNRLRPGFGGPVTEVKTD
IFVTSFGPVSDVEMEYTMDVFFRQTWIDDRLKFEGPIEILRLNNLMVSKIWTPDTFFRNG
KRSISHNMTTPNKLFRIMQNGTILYTMRLTINAECPMRLINFPMDGHSCPLKFGSYAYPM
SEIVYTWKKGPLFSVEVPQESSSLLQYDLIGQTVSSERLKSNTGEYIVMTVYFHLQRKMG
FFLIQTYIPCIMTVILAQVSFWIDKESVPARTVFGITTVLTMTTLSISARHSLPKVSYAT
AMDWFIAVCFAFVFSALIEFAAVNYFSTLQANKELRRASMACAAVRSDGELVTNPLDPGG
VLKKRLNSQRDAPERFSRAPQPDLHQQGSTVPAINTLTTSIIDKYSRILFPLSFGAFNLV
YWIVYLTKDTMESREV
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgacttggatacgctcatgttttgtcctgtattttgttggtcaggtgttggcaaatccg
ccaaccgagacgagggtatatttggataacattacgcgcattttggacagattattagat
ggatatgacaacagacttcgacctggatttggaggtcctgtcacagaggttaaaacggac
atctttgtcaccagctttggtcctgtttctgatgtggaaatggaatacacaatggatgtg
ttttttcggcaaacgtggatagacgaccggctgaaatttgagggccccattgagatcctg
cgtctcaacaacctaatggtcagcaagatctggacaccggacactttcttccgaaatggc
aaacgttctatttcgcacaacatgaccacccccaacaagctgttccgcatcatgcagaac
ggaactattctgtacaccatgaggttaaccatcaatgctgagtgtcccatgcggctgatc
aattttccaatggatggacattcatgtcctttgaaattcggcagctatgcctatccaatg
agtgagattgtttacacgtggaagaaagggccgttattttcagtggaggttcctcaggag
agttccagcctgcttcagtatgatctcattggacagacggtgtctagtgagaggctaaag
tcaaacacaggtgaatacatagtcatgacagtgtacttccacctgcagaggaagatgggt
ttcttcttgatccagacatacatcccgtgcattatgactgtgatcctagcacaggtctcc
ttctggatcgacaaagagtcagtaccggccagaactgtgtttggcatcaccacagtacta
accatgaccacgctgagcattagcgcccgtcactcgttacccaaggtctcctatgcaacc
gccatggactggttcatcgccgtctgcttcgcatttgtcttctcagcccttatcgagttc
gccgctgtcaactatttctccactttgcaggccaataaggagctccggcgggcaagcatg
gcttgtgctgcagtcagaagtgatggagaacttgttacgaatcctctggaccctggaggt
gtgctgaagaaaaggctgaactctcaaagagatgctcctgagaggttctccagagctcca
cagcctgatctccatcagcaaggctccactgtccctgccatcaacacgctcacaactagt
attattgacaagtactctcgcatacttttcccgctgtccttcggggccttcaacctggtc
tactggattgtctatctcaccaaagacactatggaatccagggaagtgtga
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