KEGG   Carassius gibelio (silver crucian carp): 127985484
Entry
127985484         CDS       T08819                                 
Name
(RefSeq) DNA repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    127985484
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cgib03400]
    127985484
DNA repair and recombination proteins [BR:cgib03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     127985484
SSDB
Motif
Pfam: XRCC1_N zf-C2HC_2 Zn-C2H2_12
Other DBs
NCBI-GeneID: 127985484
NCBI-ProteinID: XP_052443456
LinkDB
Position
B21:complement(13262221..13266261)
AA seq 427 aa
MTQHVQTHLCLCNGSIDSQRKRMAPIKIKHIVSFTSQDSKNGVNNLCEDSSSSRPWLCSV
QDRSGVLRVELQMERASAIGFIDVGNCGSAFIQVDVGRSSWSLDRPYVTLLPTATLMSPV
DSKQGTGRQNVRMFKKVDFLPQAAKESWDRLRVTCTQPFNKRSQFGLSFLRIRTVEDEAE
DSSVQHEDIAGENLSTPEKMTSVMEWLSSPAIQNTFFGRITGDVSSDHQRNAGSLSRAER
MVKAAHSNRCSLSTSPCSTTSSTTPPREDNLKSPPGGFRTSSNQLKAPQEQKKKSKARQN
LISSGTPQKRSRPTASTHEPSSTSSHRSAHQAPQGSPETRCPLCGECFSPDYLPFHASTC
LDSDSAELTGVRETELMSSQYSSALDSGADEHSVSCPLCSFRFPPDRIQQHASTCGDTVE
PGSVWMN
NT seq 1284 nt   +upstreamnt  +downstreamnt
atgacgcaacacgttcaaacacacttgtgtttatgcaatggctccatagacagtcaaaga
aagagaatggctcccatcaaaataaaacatatcgtctcgtttacatcacaggacagtaaa
aatggtgtgaataatctgtgtgaagacagtagcagcagcagaccatggttgtgcagtgtc
caggaccgcagtggagtcctcagggtggagttacagatggagcgagcctccgctatagga
ttcattgatgttggcaactgtggctctgcgttcattcaggttgatgtcggccgctcctcc
tggtcattagaccgtccttatgtcaccctgctgcccaccgcaacactcatgagtccagtg
gactccaaacagggcactggccggcaaaatgtgcgcatgtttaaaaaagttgattttctc
cctcaggctgcgaaggagagctgggacagactacgagtcacctgcactcagcctttcaac
aaacggtcacagttcggtctgtcctttctgcgcatccgcaccgtggaagacgaggccgaa
gattcctcagtacaacatgaagatatcgctggtgaaaatctgagcacaccagaaaagatg
acatctgtgatggagtggctttccagtccagctatccaaaacacgttttttggacgaatc
acaggggatgtctcctcagatcaccaaaggaatgctgggagtttgagtcgggcagagcgc
atggtcaaagctgcccactcaaacagatgctccttgtcaacatccccctgcagtaccaca
tccagcacaacacctccgagagaagataacctgaaatccccaccaggtggatttaggact
tccagtaaccaactaaaggcccctcaagagcaaaagaaaaagtcaaaagcacggcagaac
cttataagcagtggcactccacagaagagatccagacctacagcatccacccatgaaccc
agctcaacgagctcacacagaagtgcccaccaggctccacagggctctcctgagaccaga
tgtcctctttgtggagaatgcttcagtcctgattatctgcctttccatgcctccacctgc
ctggattctgattcagccgagctcacaggagtcagggaaacagagctcatgagctcacag
tactcttctgctttggactctggcgcagatgagcattcggtttcgtgtcctctttgctcc
ttccgattccccccagaccgtatccagcagcacgccagcacctgtggagacacggtcgag
ccaggttctgtgtggatgaactga

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