Carassius gibelio (silver crucian carp): 127985575
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Entry
127985575 CDS
T08819
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127985575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127985575
03036 Chromosome and associated proteins [BR:
cgib03036
]
127985575
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127985575
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
127985575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
127985575
NCBI-ProteinID:
XP_052443580
LinkDB
All DBs
Position
B21:complement(11769140..11794723)
Genome browser
AA seq
1810 aa
AA seq
DB search
MFNKSFGTPFGGGTGGFGTTSTFGQQNTGFGAAGGFGSAAFGATNNTGGLFGTTQNKPGG
LFGSSTFSQPVTSSTSSGFGFGATSGTSNSLFGSTNTGGGGLFSQQNNAFGATKPSTFGT
FGTSTSSGGLFGTTNTTSNPFGGTSGSLFGSSSFTAAPPGTTIKFNPLTGSDTMVKGGVT
TSINTKHQCITAMKEYENKSLEELRFEDYQAGRKGPSNPMAAGTGGLFGAAAAPTPSTGT
GLFGSSAPNTGFSFGQNKTSFGTSTGAFGTTTGSLFGQPQQQQQQQQQQQQQQQQGSSLF
KPFGSATTTQNNTFSFGNSSSMGMFGNTAASQAGGLFGNTNTSSATGFGTGIFGQTNTGF
GNVGTQSLFGNKPAGFGTTTTSAPSFGTGTGLFANKPTLTLGANTNTSTFGFGAPGTGGG
LFGNKTAPTGLGTGLGTGFGGVAGAGQTSLFGNNQNKLGSTLGSVGTFGTGGFNTGANTL
NFGAPQQPVALTDPNASAAQQAVLQQQINALAYSPFGDSPLFRNPLSDPKKKEERLKPTN
PAAQKALTTPTQYKLTPRPATRVRPKALSSSGSSKSQLFDGLDDNEPSFNNGAFMPRKSI
KKLVLKNLNNSSLYNSSVNREADDLASPSEYPQNGLRLSMDEGETRDVTVERSGEDDLEV
SKFYTNPITKPIPHAQPSPLLQDTILEFNMRGTASHRNGLEASSEDISLAEDSIQEERDE
ELEALRPPHPAGIVLSRMGYYTIPSMEELGRMLNENGECIVENFTVGRKGYGSVFFSGEV
NLTDMNLDEIVHFRRKEIIVYPDDKDKPPIGEGLNRRAEVTLDGVWPNDKTTCSQIKSLD
RLTEMNYEGRLEAASRKQGARFLEYRPETGSWVFEVAHFSKYGLQESDEEEEVPPAKLDL
KKLKTGVPPGIPQLPLTQQQMAPQAQSTAVLELLSRVSELDSDMADITQEHLADSVLGDE
DGERTLEEKLRSETPAEHEPVSASSQIASSMGINPHTLQIMKASLFAEDDECDLFQEHGA
SKLLQDVASPKVLLSGAGRQSIGALLQTKFTSGGGLFSQLPEAPFSGIPKRLSKSLASES
PWPSLGPSFLLPAPPPEPTLRTVGARRLGGPVPLESSITLGKGRLLMDAALFRGRSFRVG
WGPNWTLVHCGDQLSVTEAMKEQSAEIMGFGFLPKPTKSKPITESPFKVRMEQVVGLEPK
QSAESLALYHRPLEIGLKYSTINTEDYCPFIQPAKGVDALHGYAEWIMEVNKDIRGGDAC
LAHWRQVWTLCAALWGRLGDRDVETEQYSDYQQQLERRRSFSHWLSECAAECIEEEVGRA
LQRSHAEAIFSYLTGHCISKACKLSQKSGDHRLALLLSQAVGSQFCRDLLALQLSDWNGM
QTDSFIEEDRLRIFALLAGKPVWQSTDSCKNVCSELDWKRCVAVHLWYMLPPTSSVADAL
DKYESAFQGSEEVKRYACPPLPPYMDELELLGLDEEMDETESKKPLYDICFHLLKLYSDR
HYSLQQLLDPSTVTADHLDYRLSWHLWNVLQALNYNHLSTSCQGLLHASYAAQLESAGLW
EMAIFVLLHIPDSGRRESAVREMLNLHCSLEETEESMEKEQFLTEKLLIPIQWIHQAKAI
RACREGDKRSEALHLYKAGHWNHCHRLVIQHLASDCIINDNHKYLLEFLEGLAVPERSVK
IQDWDTSGRVYLDYIHVIQMLQDIQQTESPGYELERLHTEVTSLCSRIERLPCSKAKDRL
AQSEMAKRVANILRVVLSLQQGGEGTPDPRHIPLCQLAPHIGRLPMPEDYALEELRSLTQ
SYLQEYVISH
NT seq
5433 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaaatcttttggaactccctttgggggagggacgggaggatttgggactact
tcaacatttggacaacaaaatactggatttggagcagcagggggctttggatctgcagca
tttggggcaacaaacaacaccgggggacttttcgggaccacccagaacaaacctggtggc
ctatttggctcaagtaccttcagtcagcctgtcacatcctccactagtagtgggtttggg
tttggtgctaccagtggcacatcaaacagcctttttggaagcaccaacactggaggtgga
ggattgttttcccagcagaataatgcctttggtgccaccaagccatccacttttggcact
ttcggtaccagcaccagtagcggtggattatttgggacaaccaacacaacatccaaccca
tttggaggaacatcaggctctttgtttgggtcctcaagtttcactgctgctccccctggc
acaacgatcaaattcaatccactaactgggagtgacacaatggtaaaaggaggtgtaaca
accagcatcaacaccaaacaccagtgtatcactgccatgaaggaatacgagaacaaatcc
ctagaggaattgaggtttgaggattaccaggcaggaaggaagggtccctccaaccccatg
gcagctggcacgggtggcctctttggtgcagcagctgcacctactcccagtactggcact
ggactctttggatcctccgctccaaacactggcttcagcttcggccagaacaagacctca
tttggcacaagcactggggcatttggtacaactacaggaagtttatttggccagccgcag
cagcagcagcagcagcaacaacaacaacaacagcagcaacagcaaggttccagtctcttt
aagccatttggctccgctaccaccacccaaaacaacaccttctcctttggcaacagcagc
agcatgggcatgtttggcaacacggctgcctctcaggctggaggactgtttggaaacact
aacacaagttctgccacaggcttcggtacaggaattttcggccaaacgaatactggcttt
gggaatgtgggaacacagagtctttttggtaataagcctgctggatttggcaccaccacc
actagcgcaccctcctttggaacaggcactggtctgtttgcaaataagcctacgcttact
ctaggggctaacacaaacacctcaacctttggatttggtgcacctggtactggtgggggt
ctctttgggaataaaactgctccaacaggcctgggaacaggactgggaactggctttgga
ggagttgcaggagctggccagacgtcattgtttgggaacaaccagaacaagctgggctcc
accctagggtcagtgggtaccttcggcactggaggcttcaacactggagccaatactctg
aattttggggctcctcaacagcctgttgctctgacagaccctaatgcatcagctgcgcag
caggctgtcctccaacagcagatcaatgcattggcctactctccttttggagactcaccc
ctcttcagaaatccactttcagacccaaagaagaaggaagagcgtctgaagcccacaaat
ccagctgcccagaaagccctgactactcctactcagtacaaactgacccctcgtcctgcc
acccgtgttcgtcccaaagctctgtcctcctcgggctcctccaaatctcagctctttgat
ggacttgatgataatgaaccctcttttaacaatggagccttcatgcctaggaagagcata
aagaagctagttttgaagaatctgaataacagcagtctgtataacagctctgtgaacaga
gaggctgatgacttggcctccccttcagaatacccacaaaatgggctccgtctgagtatg
gatgaaggagagaccagagatgtgactgtggagagaagtggggaggatgatctggaggtc
tccaagttctacacaaacccgatcaccaaaccaattccacacgcccagccaagccccttg
ctacaggacacaatcttagagttcaacatgcggggaactgccagtcatcgcaatggcctg
gaggctagcagcgaggacatatctctagcagaggattccattcaggaggaaagagatgag
gagctggaggctctgagaccacctcacccagctggtatagttctttcccgtatgggctac
tacaccatcccatcaatggaagagctgggaaggatgttgaatgagaacggggagtgtatt
gtggagaacttcactgtcggcaggaaaggctatggatcagttttcttctctggtgaagtg
aatcttactgacatgaacctggatgagattgtgcacttcaggcgtaaggagataattgtg
taccctgatgacaaagacaagcctcctattggagagggactaaacagacgtgccgaggtg
actctagatggtgtgtggccaaatgacaagacaacatgctctcagattaagagtctagac
aggctgactgagatgaactacgagggccggcttgaggcagcctctcgtaaacagggcgcc
cgtttcttggaataccgacctgaaactggctcctgggtctttgaggtggcccacttctca
aagtacggactccaggaatctgatgaagaagaggaagtccccccggcaaagcttgacctg
aagaagctgaagaccggtgttccacctgggatcccacagcttccactgacccagcagcag
atggcaccacaggctcagagtacagcagttcttgagctgctcagccgtgtgtcagagttg
gacagtgacatggctgacattactcaagaacacctggcagacagtgttttgggtgatgag
gacggagagagaactttggaggagaagctgagatctgagactcctgctgagcacgagcca
gtgtctgcatcgagtcagattgcttcctcaatgggcatcaaccctcataccttacagatc
atgaaggcctctctctttgcagaagatgatgaatgtgacttgtttcaagagcatggtgct
tcaaagctcctacaggatgtggcttcccccaaagtcttgctttctggagctggtcggcaa
tcaattggagcccttttacaaaccaagttcacctcaggaggaggacttttttcccagttg
ccagaggctccttttagtggaatacctaagaggcttagcaagtcactagcatcagaatct
ccatggccatctttgggtccgtccttcctgttgccagcccctcctccagaacctactctt
cggactgttggggcccgcaggcttggggggccagtacctctggagagctccataactcta
ggaaaaggccgtctgctgatggatgctgctttgttcagagggcgatctttcagagtgggc
tggggtcccaactggaccctggtgcactgtggagatcaacttagtgtcacagaggcaatg
aaggagcagtcagcagagatcatgggatttggtttcttacccaaacctaccaaaagcaaa
ccgatcactgaaagtccatttaaagtgcgtatggaacaggtggtcggcctggagccaaaa
cagtcagcagagagccttgctctgtatcacagaccactggagattggtctaaagtacagc
acaatcaacacagaggactactgtcccttcatccagccagcaaaaggagtggatgctctg
catggttatgcagagtggattatggaagtcaacaaagatataagaggaggggatgcttgt
ctggcccattggcgccaagtttggaccttgtgtgctgctctttggggtcgtctgggtgac
cgggatgtggagactgagcaatactccgattaccagcagcagcttgagaggcggaggagt
ttctcgcactggctctctgagtgtgcggctgaatgcattgaggaggaggttggccgagcc
cttcagcgcagccatgctgaggccatattcagttaccttactggccactgcataagcaag
gcctgcaaattgtcccagaagagtggggaccatcgtcttgctctgttgctgtctcaggct
gttggctctcagttttgtagagatctattggctctgcagctcagtgactggaacggcatg
cagaccgactccttcatagaggaggacagactgcgaatatttgctttgcttgcaggaaaa
ccagtgtggcagtcaacagacagttgtaaaaatgtgtgctccgagcttgactggaagcga
tgtgttgctgtccatctctggtacatgctgcctcccacttcatctgtagccgatgcactc
gacaaatatgaatctgcatttcagggttcagaggaagtgaagaggtatgcttgccctcct
ttacctccttacatggatgaacttgagttgttgggtttggatgaagagatggatgagact
gaatccaaaaagccactctatgacatctgcttccacctgctcaaactttacagtgacagg
cactatagccttcaacagctactagatcccagcacagtaactgctgatcatttggactac
cggctgagctggcacctgtggaacgtattgcaggctcttaactacaaccacctgtccacc
tcatgccagggcttgctgcatgccagctatgctgcccagctggagagtgcgggattatgg
gaaatggcaatcttcgtgctgctgcacatacctgactctgggcggagagagagtgcagtg
agagagatgctcaacttgcattgctcccttgaggagacagaagagtcgatggagaaagag
cagtttctcacagaaaagttgctaatccccatccagtggatacatcaggccaaggcaatc
cgtgcttgtagagagggagacaaacgtagtgaggctttgcacctttacaaggccggccat
tggaatcactgccatcggcttgtcatccagcacctggcctcagactgcatcattaacgat
aatcataagtaccttctggaattcctagaggggttagcagtgcctgagcgcagtgttaag
attcaggactgggacacgtctggacgagtctatcttgattacatccatgtcattcagatg
ctgcaggacatccaacagactgaaagcccgggttatgagctggagcgactgcatacagag
gtgacgtctctctgcagtagaatagagcgcctcccctgctccaaagctaaagacagactt
gcgcaatcagagatggccaaacgtgtggctaacatccttcgggtggtcttgagtctccag
caaggtggtgaaggcaccccagatcccagacacatccctctttgccagcttgcgccacac
attggacgtctacccatgccggaggactatgctttagaggaactccgcagccttactcag
tcgtacctgcaagagtatgttatcagtcactga
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integrated database retrieval system
