Carassius gibelio (silver crucian carp): 127985692
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Entry
127985692 CDS
T08819
Name
(RefSeq) LOW QUALITY PROTEIN: 5-hydroxytryptamine receptor 3A-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
127985692
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgib04040
]
127985692
Ion channels [BR:
cgib04040
]
Ligand-gated channels
Serotonin (5-HT3)
127985692
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Ortholog
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF6935
Motif
Other DBs
NCBI-GeneID:
127985692
NCBI-ProteinID:
XP_052443707
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All DBs
Position
B21:complement(16802243..16816795)
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AA seq
730 aa
AA seq
DB search
MFQIWNDEFLVWDPEEFDGITEISLSSDAIWVPDVIISEFVDVGKSPVIPYVYVNCSGTV
KNYKPIQVVSACHLEIYAFPFDKQNCTLTFRSWLHSVNEVDLVLWRPAEEIANDTRGFMN
DGEWELLSVPSHYWTLNLEDRVYAQIQFNVLIRRRPLLYVVSLLIPSIFFMVVDVTSFYL
PPNSGTRITFKTSILLGFTVIRVNLMDEIPATAIKTPLIGAFFAVCMALLVLSLAMSIFV
VKLLHYSEKEVKEMSMSACLLDKYGSMDQSFIESKLSNNTGRFANATLVRLNEFLSAGYK
KGVRPVRDWRQSTTVAIDLMVYAILNVDEKNQVLTTYVWYRQQWIDEFLAWDPEEFDDAK
QISIPTANIWVPDILINEFVDVGKSPDIPYVYVNYTGLVRNYKPIQVVTACSLNIYNFPY
DVQNCSLTFQSWLHTTKDINITLMRTPEEVMNDKSVFMNQGEWELLHVLSTYKEFSVDND
DYYAEMKFHVVIRRRPLFYTVNLLLPSVFLMVMDIVGFYLPPDSGERVSFKITLLLGYSV
FLIIVSDTLPATAIGTPLIGVYFVVCMALLVISLTESVLIVRLVHKQDLQSRVPQWVKHL
VLEKATVLLCIRNRKQRLPTTSSLSKXNXSLILXAVHCNHHISEGSRDSGRTLGLGLSTR
DSGSPVMDGILREITTIRQFMEKKDESREIAKEWLQVGYVLDVLLFRVYLLTVLAYSITL
GTLWSVWQNV
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagatatggaacgatgagtttcttgtttgggatcctgaagagtttgatggaatc
actgaaatatcgctgtcctcggatgccatctgggtgcctgatgtcatcataagtgaattc
gtcgatgttggcaaatccccagtcatcccatatgtttatgtcaactgctcaggaacagta
aaaaactacaaacccatccaggtggtctcagcctgtcacctggagatttatgcctttccc
tttgacaagcagaactgcactctgacctttcgcagctggctccactcagtgaatgaagtg
gatttagttctgtggaggcctgctgaggaaatcgccaatgatacgagagggttcatgaat
gatggtgaatgggagctgctgtctgtgccttctcactactggacactgaacctagaggac
agagtctacgcacagattcagtttaatgtgctgatccgcaggcgccccctgctgtacgtg
gtaagtctgctcatcccgagcatcttcttcatggtggtggatgtcaccagcttctatctg
cctccgaacagtggcactcgcatcactttcaagaccagcattctcttgggtttcactgta
atcagagtgaatctaatggatgaaatccctgctaccgctattaaaacccccctcattggg
gccttcttcgctgtctgcatggcactgctggtgctgagtttggcaatgtccatatttgta
gtgaagcttttgcattacagtgagaaggaggtcaaggagatgtccatgtccgcttgctta
ctagacaaatacggctcaatggatcagagctttattgagagcaagctaagcaacaacacc
gggcgtttcgccaatgccactctggttcgtctaaatgagtttttaagtgccggatataag
aaaggagttcgaccagtgcgcgactggaggcagtcaacaacagtggctattgacctaatg
gtttatgcgattcttaatgtggatgagaagaaccaggtcttgacgacttatgtctggtac
agacagcaatggatagacgagttccttgcgtgggatccagaagaatttgatgacgctaaa
cagatatccattcccactgccaacatctgggttccagatattcttatcaatgaatttgtg
gatgtgggaaagtctcctgatattccttacgtctatgtaaactatactgggcttgttcgc
aactataagcctatccaggtagtgaccgcctgctccctcaacatctacaactttccttat
gatgtccaaaactgtagcctgactttccagagctggctacacacaactaaagacatcaac
atcacactaatgagaacccccgaggaagtaatgaatgacaagagtgtgttcatgaaccag
ggagaatgggagctgcttcacgtcctctctacatacaaagagttcagcgtagataatgat
gattactatgccgaaatgaagttccatgttgtgatccgacgcagacctctgttctacaca
gtcaacctcctgttgcccagtgtattcctgatggtgatggacatcgttggattctacttg
cccccagacagcggcgagagagtatccttcaagatcaccctgctcttgggctattctgtc
tttctcatcatcgtctctgacactctgccagcgaccgccatagggacccctctcattggt
gtgtactttgtggtatgcatggcgctgctggtcatcagcctgaccgagtctgttttgatc
gtgaggctggtgcacaagcaggatctgcagtctcgtgtgccccagtgggtcaaacatctg
gtgctggagaaggccacggtgctgctctgcattcgcaacaggaagcaacggctgccaacc
acttcatctcttagcaaatgaaattgatctttgattctttaagcagtccactgcaaccat
cacatctcagagggctccagagactctgggagaaccctgggtttggggctgtccacgcgg
gacagcgggtctcctgtcatggacggcatcctgcgtgaaatcaccaccatccgccagttc
atggagaagaaggatgagagcagggagatcgctaaagagtggcttcaggtggggtacgtg
ctggacgtcctgctgttccgcgtctacctgctcaccgtgttggcctacagcatcacttta
ggcacactgtggtccgtctggcagaacgtctga
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