KEGG   Carassius gibelio (silver crucian carp): 127985698
Entry
127985698         CDS       T08819                                 
Name
(RefSeq) nuclear RNA export factor 1-like
  KO
K14284  nuclear RNA export factor
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03008  Ribosome biogenesis in eukaryotes
cgib03013  Nucleocytoplasmic transport
cgib03015  mRNA surveillance pathway
cgib05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    127985698
   03015 mRNA surveillance pathway
    127985698
   03008 Ribosome biogenesis in eukaryotes
    127985698
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    127985698
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgib03019]
    127985698
   03009 Ribosome biogenesis [BR:cgib03009]
    127985698
Messenger RNA biogenesis [BR:cgib03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     127985698
   mRNA cycle factors
    Stress granule specific factors
     127985698
Ribosome biogenesis [BR:cgib03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    127985698
SSDB
Motif
Pfam: LRR_NXF1-5 NXF_NTF2 Tap-RNA_bind TAP_C NTF2 UBA_8 LRR_8 LRR_9 LRR_4
Other DBs
NCBI-GeneID: 127985698
NCBI-ProteinID: XP_052443717
LinkDB
Position
B21:14901320..14911880
AA seq 640 aa
MATSDDSRYYSEHDDRVGGPKHRNRKGRGPFRAPLYSDPISRPRHRGGHGGGGGGPGPRT
RLQDDDGDVAMTEGPQDSGGQRRFNPYGRPQNRRDNRKGGRGGGGGGGGAGGNDDRGGNR
YGARGGGGGSGSDGNRKNWFKMTIPFGKKYDKDWLLSSLQSVCSMPFHAVHYHTDGNKAQ
FYVEDATTANALFKVSRKITDKDGYKVTVIMNSCPPPALIHTDLKAADLEHLKQCMAKRF
DGSQQALDLNNIRVDPDLVSQNIEVTLNRRNSMLAVIKIIEENIPELICLNLSNNRLFRL
DDLADIANKVPNLKILNLSHNELKTERELDKLKGLKLVELLLEGNPLCGHYKNQADYVSA
VRERFPKLLKLDGHVLPPPIGFDLEVAPATLPPSKASYFCSEEIKNIILCFLQQYYSIYD
SGDRQPLLDAYHDGAAFSLSIPFTLQNASKSSLGEYQKDCRNIRRMKDDPTTRFRLIKHT
RLNVVAFLNELPKTQHDIASLIVDVNTYTATLLAFTVSGVFKENGKSRDSFRAFSRVFIA
VPAGNAGLCIVNDELFVRNATTEEIRRAFVAPAPTPSSSPVPTLSAPQQEMLAAFSLMSG
MNLEWSQKCLQDNEWDFDRAAQIFTGLKAQGKIPDVAFVK
NT seq 1923 nt   +upstreamnt  +downstreamnt
atggcgacatcggacgactcgcgctactatagtgagcatgatgaccgtgttggtggacca
aagcatcgtaaccgtaaaggcagaggtcctttcagagccccgctgtacagcgatccgatt
tcacggccgaggcatcgaggtggtcacggtggtggtggaggaggccctggtcctcggacc
agacttcaggatgatgatggagatgtggccatgaccgaaggtcctcaagacagtggtggc
cagcgcagattcaatccatatggccgaccacagaatcggcgagataatcgcaaaggtgga
cgtggtggtggtggaggcggcggaggtgcaggtggaaatgatgatagaggtggcaatcga
tatggagccagaggaggtggaggtggcagtggttctgatggaaaccgcaagaactggttt
aaaatgactattcctttcgggaagaaatatgacaaagattggcttttgtcttcacttcag
agcgtctgttccatgccattccatgccgttcattatcacactgatggcaacaaggcccag
ttttatgttgaagacgccacaactgctaacgctttgtttaaagtgtcacggaaaataacg
gacaaagatggatataaggtgaccgttattatgaacagctgcccaccacctgctttgatt
cacactgatctgaaggccgcagatttggagcatttgaaacaatgcatggctaaacgcttt
gatgggtcacagcaggctcttgatctgaacaacatcagagtcgatccagatttggtttct
caaaatattgaggtcactttaaatcggaggaactccatgttggcggttatcaaaataatt
gaggagaacattcctgagctgatttgtctgaacctaagcaacaaccggttgttcaggctg
gatgacttggcggatattgccaacaaagttcccaacttgaagattctcaatctttcacat
aacgagctgaagaccgagagagagcttgataaactgaagggtctgaagctggtggaactg
ttgttggagggaaatcctttatgtggacactacaagaaccaggccgactacgtcagtgcc
gttcgggaacgattccccaagctgctcaaactggatggacacgtccttccgcctcccatt
ggttttgatttggaagtcgctcctgcgactcttcccccctccaaggctagctacttctgc
tctgaagaaatcaagaacatcatcctttgcttcctgcaacaatattacagcatatatgac
tccggagacagacagcccctgctggacgcctaccatgacggggcagctttctccctcagt
attcccttcaccctgcagaacgcttcaaaaagtagtttaggggagtatcagaaagactgt
cgcaatatcaggcgtatgaaagacgaccccactacacggtttcgtttgatcaaacacaca
agattaaacgtggtggctttcctgaacgaactccccaaaactcaacatgacatcgcctcc
ttgatcgtagatgtcaacacctacacagctacattgttggcatttacagtcagtggagtt
ttcaaagagaatggcaaatcgcgagactcattcagagccttctcccgggtgttcattgcc
gtacctgctggaaatgctggtctgtgcattgtgaatgacgagctcttcgttcgaaatgcc
actacggaggaaattcgacgtgcatttgttgccccagcccccacgccgtccagcagccct
gttcccactctgtccgccccgcaacaagaaatgcttgctgccttctccctaatgtctgga
atgaacctagaatggtctcaaaagtgcctacaagacaacgaatgggattttgacagggct
gctcagatcttcactggccttaaggcacaaggaaagatcccagatgtcgcgttcgtcaaa
taa

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