Carassius gibelio (silver crucian carp): 127985702
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Entry
127985702 CDS
T08819
Name
(RefSeq) lymphoid enhancer-binding factor 1-like isoform X1
KO
K02620
transcription factor 7
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04310
Wnt signaling pathway
cgib04520
Adherens junction
cgib04916
Melanogenesis
cgib05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
127985702
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
127985702
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
127985702
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
127985702
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127985702
Transcription factors [BR:
cgib03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
127985702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
127985702
NCBI-ProteinID:
XP_052443721
LinkDB
All DBs
Position
B21:complement(6000321..6051083)
Genome browser
AA seq
456 aa
AA seq
DB search
MPQLNGGGGDDLGANDEMIAFKDEEDHEKIRESAFTESDLADLKSSLVNESEISQNSNSA
VIRRGQQEDQRIYTDKREHLDNVPKHQDGGMYKASYSGYPFLMLPEPYLPNGPVSPSSNK
VSVVQQGMHPLTPLLPYDHFNPSPPHIPTDVSQKPGVHRHQSQEISGFYSLPQGQITPSM
NWPNQPVYPLPSCGFRQSFSSSLQSSSSFPRFSHSLMLQSGMHPTGIPHPAIVPSSGKQE
HDQFDRNMYTKSHAEMKREKEPKKPVIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQI
LGRRWHALTREEQAKYYELARKERQLHMQLYPSWSARDNYGKKKRRKRDKQQDSGTDPGS
PKKCRALFGLQHQTDWCGPCRRKKKCIRYLQRGRCTSPHSSDGSAIDSSPSPVNHLPNPA
SPTSSPLPQSAKRPAHSPRLSLDFSRIKTESHNNPD
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagctgaacggtggagggggagatgatctcggggcgaatgatgagatgatcgcg
tttaaagatgaagaggatcacgagaagatccgcgagagcgcgttcacggagagcgacctg
gctgatctcaaatcatctctggtcaatgaatccgagatcagccagaactcaaactctgct
gtgatcagaagaggacagcaggaagatcagaggatctacaccgataaacgagaacatctg
gacaacgtgcccaaacatcaagatggtgggatgtataaagcatcttattctggatacccg
ttcctgatgctgcccgagccgtatctcccgaacggacccgtctctccatcttccaacaaa
gtgtcggtggtccagcaggggatgcatcctctgacgccgctgcttccctacgatcacttc
aaccccagtcctccacacatccccacagacgtcagccagaaaccaggtgttcacagacat
cagtcacaggaaatctccggcttctactcgctgcctcaaggccagatcactccgtccatg
aactggcccaatcagcctgtctatcctctgccctcctgcggcttcagacagtccttctcc
tccagcctccagagcagctcgtccttccccaggttctctcattctctgatgcttcagtcc
ggcatgcaccccacaggcatcccacaccccgcgatagtgccttcctccggcaaacaggag
cacgatcagttcgacaggaacatgtacaccaaatctcatgcagagatgaagcgcgagaag
gagcccaagaagccggtgatcaagaagccgctgaacgcgttcatgctctacatgaaggag
atgagagccaaagtcatcgctgagtgcacgctgaaggagagcgccgccatcaaccagatc
ctgggacgacggtggcacgctctgacccgcgaggaacaggccaagtactatgaactagcg
cggaaggagcgacagcttcacatgcagctttatcccagctggtcggcccgcgacaactac
ggcaagaagaagcggaggaaacgagacaagcagcaggactcaggcacagaccccggctcg
ccaaagaaatgccgcgctctcttcggcctccagcatcagacggactggtgcggtccctgc
aggaggaaaaagaagtgcattcgctaccttcaaagaggacgctgcaccagcccccattct
tccgatggaagtgctatagactcctccccttcacctgtcaatcacctgccaaaccccgcc
tcccccaccagcagtcccctcccacagagcgccaaacgccccgcccactcgcccagactc
tcgctcgacttcagcagaattaaaacagagagccacaataacccagactga
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