Carassius gibelio (silver crucian carp): 127985747
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Entry
127985747 CDS
T08819
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4-like isoform X1
KO
K13305
E3 ubiquitin-protein ligase NEDD4-like [EC:
2.3.2.26
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04120
Ubiquitin mediated proteolysis
cgib04144
Endocytosis
cgib04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127985747
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127985747
09144 Cellular community - eukaryotes
04530 Tight junction
127985747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127985747
04121 Ubiquitin system [BR:
cgib04121
]
127985747
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
127985747
Membrane trafficking [BR:
cgib04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
127985747
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
HECT type E3
127985747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
MUG113
Motif
Other DBs
NCBI-GeneID:
127985747
NCBI-ProteinID:
XP_052443829
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All DBs
Position
B21:22421853..22485201
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AA seq
1283 aa
AA seq
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MSHRLRLYFGSGRSNTAPELEQLNGTVEDGDEIGYSGAGAMMFHTQTQNGGLSESPESGA
CSDASLKRSSSMFIPQLQGQTEPRMTKSTSVQISLQRSTAPQEDSLPSDPPPGYPQEPAP
AYTETGESWLLPPPPAYHRGDAPSYQSLETGTEPIQPNRQVFCVRPCDGQNGYASLGVPS
NQGITIGGVCIRRRSADGSDVQQFRIMPYSENGQNGHHWSVQQSSDRGPGTQRLVFQLQQ
DQGRHLSPTQADVSDLGITGTKGSRLVRYPRIRLERSTSQPLYPRGLPSRLGSMPNLHAP
ISEMETESEIVENSAQGCTFKIKKEQNSQQPKFKIYFSQGGEHSPILARDISFGKVPTYN
NPQAHIGHGRSKNGHFNHGQTRDDFLGQVDVPLSHLPTEDPAMERPYTFKDFLLRPRSHK
SRVKGYLRLKMAYLPKNGGHEEESSEMREEAEGWEVSDSTDPGSQRPQQLLPPLPLGWEE
KVDNLGRTYYVNHNNRTTQWKRPSSVDVVSETENDNNLRQINQEAHRVFRSRRHISEDLE
NEQLDIRDIDDSWEPISEEDPTLMTDGLNHSLSGPASLAMPLSSTPEFSDEISLRLSLAP
DTNGEIPGPSSAVQSHLSSRLRSSSMTDGVSDQAQPPTPTQSSQTRRTRAQTVTGVEDTM
SPSASYALTTPGLPPGWEERKDNKGRTYYVNHNNRSTTWTRPILQQHTEDGASASAAAVG
GATAATPPASTPSSSSGHLSEPQVRRPRSLSSPTVTLSSPLEGANNAQIRRAVKDTFSNP
QSPQPSPYSSPKSQHKANQSFLPPGWEMRIAPNGRPFFIDHNSRITTWEDPRLKYPVHMR
TKASLEPGDLGPLPNLPEEPGWEERVHADGRTFYIDHNTKKTQWEDPRLQSPAITGPAVP
YSREFKQKYDYFRKKLKKPADIPNRFEMKLHRNNIFEESYRRIMSLKRPDSLKARLWIEF
ESEKGLDYGGVAREWFFLLSKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSYFKF
IGRVAGMAVYHGKLLDGFFIRPFYKMMLGKHITLNDMESVDSEYYNSLKWILENDPTELD
LRFCIDEDNFGQTYQVDLKPSGSDMVVTNDNKKEYIDLVIQWRFVNRVQKQMNAFLEGFT
ELIPIDLIKIFDENELELLMCGLGDVDVNDWRQHTIYKNGYCPNHPVIQWFWKAVLLMDA
EKRIRLLQFVTGTSRVPMNGFAELYGSNGPQLFTIEQWGTPDKLPRAHTCFNRLDLPTYE
SFEDLREKLLMAVENAQGFEGVD
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaccggcttcggctgtattttggatcgggtcgcagtaacactgcaccggagttg
gagcagctaaatgggacagtggaggacggagatgagattggctacagcggcgccggggct
atgatgttccatacgcaaactcaaaacggaggactttcagagagcccagaatcgggtgct
tgttcggatgcctctctaaagcgaagctcttccatgttcatcccacagctccagggtcaa
actgaaccacggatgaccaagagcacctctgtccagatatcccttcaacgctcaactgca
cctcaagaagattcattgccctctgatccacctccagggtaccctcaggagccagctcct
gcatacactgagactggtgaaagctggcttttacctccacctccagcctaccacagagga
gatgccccatcctaccaaagtctggaaacaggtactgagcctatccagcctaacaggcaa
gtgttttgcgtccggccgtgtgatggacaaaatggctatgctagtttgggagtacccagt
aatcaagggattaccattggaggtgtctgtattcgaagaaggtccgcagatggctcggat
gtccagcagttcaggatcatgccatacagtgagaatggccagaatggccaccattggtct
gtccagcaaagctcagacagaggtcctggaactcaaagactcgtcttccagcttcaacag
gaccaaggaagacaccttagccctactcaggctgacgtgagtgatttgggcataacgggt
actaaaggcagccgcttggtgcggtaccctcggatccgacttgagaggagcacttcacag
ccgttatatcccagaggccttccttcccgtctcggatctatgccaaatcttcatgccccg
atctcagaaatggagactgagagtgagatagttgagaacagtgctcaaggttgcacattc
aaaattaagaaggaacagaactcccaacagcccaagtttaagatctatttcagtcaggga
ggcgagcacagccccatccttgcacgggatattagctttggaaaagtgcctacctacaac
aatccacaggctcacattggtcacggtcggtcaaagaatgggcatttcaaccatggtcag
accagagatgacttcctcgggcaggtggacgtgcctcttagtcatttaccgacagaggac
cctgcgatggagcggccgtacacatttaaagactttctcctgcggccaagaagtcataag
tctcgggtgaaaggctacttgaggctgaagatggcctatctgccaaaaaacggagggcat
gaggaggaaagcagtgagatgagagaagaagctgagggctgggaagtgtcagactccacg
gatccaggttcacagagacctcagcagctcctgcctccgctgcccctgggctgggaagag
aaggtggataacctgggacggacatactatgtcaaccacaacaaccgcaccacacagtgg
aagaggcccagtagtgtggatgtggtttcagaaacggaaaatgataataacttgcggcag
attaaccaggaagcccacagagttttccgctctcgacggcacattagtgaagacctggaa
aatgagcagctggacatcagggacatagacgactcatgggaacccatatcagaagaggac
ccaactttaatgacggacggtctgaaccattctctgtccggaccggcctctctggcgatg
cccctttccagcactccagaattctcggatgaaatcagccttagattgtctctcgctcca
gacacgaacggagaaatcccaggacccagctctgctgtgcagagtcatctttcctctcgg
ctacgctcctctagtatgaccgatggagtcagtgatcaagctcaacctcccacgccaacg
cagagctcccagacccgacgaacaagagcacaaacggtcacaggcgttgaggacaccatg
tctccatcggcctcctacgccctgaccacaccaggccttccgccaggctgggaggaacgc
aaagacaacaagggacggacatactacgtcaaccacaacaaccggagcaccacctggacg
cggcccattctgcagcagcacactgaagatggagccagtgcctcagctgcggcagtaggg
ggcgctacagcagccacgccccccgcttccaccccttcctcctccagcggccatctaagc
gaaccacaagtgcgcagacctcgtagcctcagttcccccaccgtcaccctctcttcccca
ctagagggagccaataacgcccaaatacggagagctgtaaaggacacgttttccaaccct
cagtccccccagccttctccctacagctcacccaaatcccagcataaagcaaaccagagc
ttcctgccccctggatgggaaatgagaatagcacccaatggacggccgttcttcatcgac
cacaacagcagaatcaccacatgggaagatcctcgcttaaagtatcccgttcacatgagg
acaaaagcatccttggaacctggtgacctcggcccacttcctaatcttccagaggagcct
gggtgggaggaacgagtgcatgcagacggaagaaccttttacatcgaccataacaccaaa
aaaacacagtgggaggaccctcggctccagagtcctgccataactggacctgcggtgcca
tattccagagaattcaagcagaagtatgattacttcagaaagaagttaaagaagccggcc
gatattccaaaccgttttgagatgaagctacacaggaataacatctttgaggagtcttac
agacgaatcatgtccctgaagagacccgacagtctgaaggctcgtctgtggatcgagttc
gaatcagagaaaggcctggattatgggggcgtggccagagaatggttcttcctgctctcc
aaggagatgtttaacccttattatgggctgtttgagtactcagccacagataactacacc
cttcagatcaatccaaactccggcctctgtaatgaggatcacctctcatacttcaagttc
atcggtcgagtggctggcatggctgtgtatcacggaaagctgttagacggtttcttcatt
cgaccattctataaaatgatgctgggaaaacacatcacactgaatgatatggagtcagtg
gacagtgaatactacaactctctcaagtggattctggaaaacgaccccacagaactggac
ttgcggttctgcattgatgaggacaactttggacagacctatcaggtggatttgaagcca
agcggatcagatatggttgtaaccaatgacaacaaaaaagaatacatagacttggtgatt
cagtggcggtttgtgaaccgggtccagaaacagatgaacgcctttttggagggcttcact
gaactcattcccatcgacttgataaagatttttgacgaaaacgaactggagctgctgatg
tgtggtctgggagatgtggacgtcaatgactggaggcagcacaccatctataagaatggc
tactgtcctaatcaccctgtgatccagtggttctggaaggctgtattgttaatggatgct
gaaaagcggatcagacttttgcagttcgtcaccggaacatccagagtgccaatgaacggt
ttcgctgaactctacggttccaatgggccgcagttgtttactatcgagcagtgggggaca
cctgacaaactccctcgtgctcacacctgcttcaatcgcctggacctcccgacgtacgag
tcgtttgaagacctgcgagagaagcttctgatggcggtggaaaacgcccaaggcttcgag
ggcgtcgactaa
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integrated database retrieval system
