KEGG   Carassius gibelio (silver crucian carp): 127985802
Entry
127985802         CDS       T08819                                 
Name
(RefSeq) gem-associated protein 5 isoform X1
  KO
K13133  gem associated protein 5
Organism
cgib  Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgib03019]
    127985802
   03041 Spliceosome [BR:cgib03041]
    127985802
Messenger RNA biogenesis [BR:cgib03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     127985802
   mRNA cycle factors
    P-body specific factors
     127985802
Spliceosome [BR:cgib03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    127985802
SSDB
Motif
Pfam: GEMI5_RBS TPR_GEMI5 Beta-prop_THOC3 WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_RIG_2nd WD40_Prp19 Beta-prop_EML_2 WD40 WD40_WDHD1_1st ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_2nd WDR55 EIF3I Beta-prop_RIG_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_HPS5 Beta-prop_WDR75_1st Beta-prop_WDR19_1st Beta-prop_IFT140_1st WD40_Gbeta WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_TEP1_C WD40_RFWD3 Beta-prop_WDR41 Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_LRRK2 WD_LRWD1 TPR_IF140-IFT172 DUF1690
Other DBs
NCBI-GeneID: 127985802
NCBI-ProteinID: XP_052443928
LinkDB
Position
B21:complement(11052668..11071948)
AA seq 1465 aa
MHQRHLPASPNWYCSRCSDINGKGVLGFGAKNTIYLVNVTAVSPAVTGELTGHTERVSGF
GFCSHDGQEHICASTSDDKTVKIWDAEQKVLLKEHNVHQSTISAVHWSPVQKLLLVTGDE
KGIVVCYWFSSNDTQSFFPEPRTIFCLSCSPHEENHIAVGYKDGMIVVIDIGKKGEVIHR
LRGHDDEIHALTWCPQPREEPLYGRSEDNTDGSNGLTEGAEMGCYLASGSRDQTVRIWST
ARGKGVMTLKLPFLKRRGAGVDPTVKERLWLTVHWPKGRPSQIVSSCFGGEIIMWDLKKS
GKQKWSLLGNSSDGQNHSRIVFNMSSFRSGDRELLLSTSMDREIKCWDLASLECCWTLPT
LGGFVYCLSFSPVGTGCLALGVGDSMIRVWNTLSIQNQYDIKTFWQGVKSKVTALAWHPL
KEGSLAFGTDDGKVGIYEVYSNKPPQISSTYHRRTVYSLSWGPPVPPMSFGGSGDKPSYS
LYSCAGEGVIFQHDPWKLSGEASNIDKLIRDTNNIKHKIPPHTDLSWKPDGSVLAIGNED
GSIEVLKAPMLKLLCTVQQHHKIINSLRWHHEHSSQNELQYLLASGSSNAVVYVHDLKSV
IETPSESPLLMTEPFRTLSGHTNKITSLAWSPHHDGRLVTVSYDGTAQVWDVLKEEPVCN
YRGHSGRLLCVQWSTVHPDLVWTGGDDFTLHEWAVSKQEHVTPPKAKKRNEMEKKRGPQK
KSKKKKKAPEKGGMKAEEIELPLGEDIKGAAGSGAEEGQSDNVEEEEERENTDGPSVTGW
SRESSLDTRCTERVQNGEKFSHAVKREVKEEKKREKPDLSLKKRKPRSILPLSTSMDHRP
KEELQQDCLTLAAVRHSHGQSGTCVPGSGDHIQLGLFTDRDALYRMFQEEEESHVEAAHY
DSMVYLRLWKGDLIGAINLAAEKGELTDHLLSLAPMAGYQVWARTVEVYVKQLCHQEQFL
KAASHLVSIHKLYEAISLLKSHQFYREAIALARARLQPEDPVLKDLYMSWAAVLEKDGHY
ATAAKCYLAADSSFDAAKVIAKKGDMISLRTAANLAQISGEDELAHSLSLRCAKDLMLFQ
DWAAAQEVLRMQDSLLGHRLVFSVNEILTQRLADADVVTWSVVSSHTWSKSCEENFLSTV
HRVWQSEFGVAATDLVKVKTLHQQLRAIENPPATTSVPLKQLLFHISLDVALCALSQLLC
DWPSVLEDLLRALTRGSEVGHFTLMTEMCQLLLTQGLESVTVYKQKLDPTDERSLVISQS
VEAFVCYQLMYKKWWSYSAETSALTINTLGNGHCLTEKNHCEVEANCNREAQSDVIFSEG
FWKVLLSEPHANLQATQRAIEEIQRRVASLIQQHQCKDSHESPQALSTSQSETSEEHGGS
LSGKSSESLSSLTAQIAEHHKALTAIPELVKKYSFPDVMECCIVLLYMGKHLTPFPQHIC
AKATTLLCKYGTKESLYKAWKRLTQ
NT seq 4398 nt   +upstreamnt  +downstreamnt
atgcaccaacgacatctgccagcgtctccaaactggtactgttcacgttgcagtgacata
aatggaaagggagtgctgggttttggagcaaagaatacgatctatctggtaaatgtgact
gcagtatctccagcagtaacaggtgaactcactgggcacactgaaagagtttctggtttt
ggattttgctcccatgatggacaagaacacatttgtgctagcacctcagatgataagacc
gtcaaaatctgggatgctgagcagaaagttctgttgaaagagcacaatgtccaccaaagc
accatctctgcagtccactggtctccggtgcagaaacttcttctagtcactggagatgaa
aagggcattgtggtgtgttattggtttagcagtaatgacacccagagcttcttccctgaa
cctcgaacaatcttctgcttatcctgctctccacatgaggaaaaccacattgcagtgggg
tataaggatggaatgatagtagtgatagacatcggtaagaaaggggaggtaatccatcgg
ctgagggggcatgatgatgagattcatgcattgacatggtgcccccaacccagagaagaa
cctctatatgggcgatcagaagacaacacagatggaagcaatggattgacagaaggagca
gaaatggggtgttacctggcatcaggtagtcgagatcaaactgtgcgaatatggagcaca
gccagaggaaaaggagtaatgaccctgaagcttcccttcctgaagagacgaggagcagga
gttgatccaacagtgaaggaaagactctggctgactgtccactggcctaaggggagacct
tcacagattgtgtccagctgtttcggtggcgagatcataatgtgggatctcaagaagtca
ggcaagcagaagtggagtctgctgggcaattcctcagatggacagaatcacagccgtatc
gtctttaacatgagctcgtttcgctctggggacagagaacttttgctcagtacctcaatg
gacagagagattaagtgttgggacctggcatctctggaatgttgttggactctgcccact
ctgggtgggtttgtgtattgtctcagcttttctccagttggcaccggctgtctggcacta
ggcgtcggggacagcatgatccgggtgtggaacaccctgtctatacagaaccagtatgac
atcaagacattctggcaaggggtcaaatctaaagttacagccttggcatggcatccacta
aaagagggctctctggcgtttggtacagatgacggtaaagtgggcatctatgaggtttac
tctaacaagccgcctcagatctcaagcacttaccaccgcagaaccgtctactccctctca
tggggccctcctgtgccgcccatgtcttttgggggatcaggagacaagccgtcctacagc
ttatacagctgtgccggagagggggtcatcttccagcacgacccctggaagctctcaggg
gaggccagtaacattgacaaacttatccgagacaccaacaacatcaaacacaagatcccc
ccccatacagacctcagctggaagccggacggcagtgttttggccattggaaatgaagat
gggtccatagaggtattgaaggcacccatgctgaagctcttgtgcacagtgcagcagcat
cataagattattaattcactgcgttggcatcatgaacactcctctcagaatgagctccag
tatctgctggcgtccggctccagtaatgccgtagtctatgtccatgacctaaagagcgtc
attgaaactccatcagagagtccattgctgatgactgaaccttttagaactctctctggt
cacaccaacaaaatcaccagcctagcctggagcccccatcacgatggccgtctggtgacc
gtgtcttatgatggaactgctcaggtgtgggatgtgctgaaagaggagccggtctgtaac
tacaggggtcactcaggccgactactgtgcgtgcagtggtctactgttcacccagaccta
gtctggaccggtggagatgacttcaccctccatgaatgggccgtatccaagcaggaacac
gtcacacctccgaaggctaagaaacgtaatgagatggagaaaaagagaggaccgcagaaa
aagtccaagaagaaaaagaaggcaccagaaaaaggagggatgaaggcagaagaaattgaa
ttgcctttaggtgaagatattaaaggagcagcaggcagtggagcagaagagggccaatca
gacaatgtcgaggaggaagaggagagggagaacacagacggtccatccgtcacgggctgg
tccagagagagcagtttggacacacgttgcactgagagggttcagaatggagaaaagttc
agtcatgcagttaaaagggaagtcaaagaggaaaagaaaagagagaaaccagatctgtct
ttaaaaaagagaaagccacgctccattctgccgttgagtacttctatggatcaccgaccc
aaagaggaacttcaacaggactgtctgacactcgccgctgtaagacactcccatgggcaa
agcggaacatgtgttccaggatctggagatcatattcagctcggcctgttcacagacagg
gatgccctctacaggatgtttcaggaggaagaggagagccatgtggaggctgctcattat
gactcaatggtgtatctgaggctgtggaaaggagatctgattggagcaataaatcttgct
gcggagaaaggagaactgactgaccatctcctcagtttagctccaatggctggctatcaa
gtgtgggccaggactgtagaggtgtatgtgaagcagctctgccaccaggagcagttcctc
aaagcagcatcacatctcgtctccatccataaactctatgaggccatcagccttctgaag
agccaccagttctaccgggaggccatagctttagcaagagctagactccagcctgaggac
cctgtgctgaaagatctgtacatgagctgggctgcggtgcttgaaaaggatggccattat
gctactgcagcaaaatgttaccttgccgcagactcgagctttgatgcagctaaagtgatt
gccaagaagggggatatgatatcgctaaggactgcggctaatctggcgcagatatcagga
gaagatgagcttgcacattctctctctctgaggtgcgccaaagacttgatgctcttccag
gactgggctgcagcacaggaagtcctgaggatgcaagactcccttttgggtcacagactg
gtgttctctgttaatgagatcctcactcaaagactggcagatgcagatgtggtcacctgg
agtgtggtttcttcacacacctggtcgaagtcctgtgaggagaacttcctctctacggtg
cacagagtgtggcagagtgagtttggagtggcggctactgacctggtcaaagtgaaaacg
ctccatcaacagctgagagccattgagaatcctcctgccaccactagtgttcctctgaag
caactcttatttcacatctcattggacgtggcactgtgtgctttgagtcagctgttgtgt
gattggccatctgttctagaggatctgctgcgagctcttactcgaggttctgaggtggga
cactttacgctaatgacggagatgtgccagctgcttctgacgcaaggtttggagtctgtg
acggtctataaacagaaactagaccccactgatgaaagaagcttggtaatttctcaaagt
gtggaggcgtttgtctgttatcagctcatgtataagaaatggtggagctacagtgctgaa
acatcagctttgaccattaacaccttgggcaatggtcactgcttaacagagaagaaccac
tgtgaagttgaagcaaactgtaacagagaagctcagtctgatgtcattttctctgagggc
ttctggaaggttcttctctctgaacctcacgccaatcttcaggccacccagagagccata
gaagagattcagaggagagtcgctagcctcattcaacagcaccagtgtaaagactctcat
gagagcccacaagcacttagtacttctcagtctgaaacttcagaggaacatggaggatct
ttgagtgggaaaagcagtgaatctctctctagtctgactgcccagattgctgaacaccac
aaagcgctcactgctattccggagcttgtcaaaaaatactcatttccagatgtcatggaa
tgctgtatcgtcctgctgtacatgggaaaacatctaactccatttccacagcacatctgc
gccaaggcaacaactttgttgtgcaaatatggaactaaagaatcactctataaagcgtgg
aagagactgacacaataa

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