Carassius gibelio (silver crucian carp): 127985807
Help
Entry
127985807 CDS
T08819
Name
(RefSeq) neurogenic locus notch homolog protein 1-like
KO
K02599
Notch 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
127985807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Ank
Notch
NODP
NOD
Ank_3
Ank_5
Ank_4
EGF_3
EGF_DL_JAG
cEGF
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
127985807
NCBI-ProteinID:
XP_052443935
LinkDB
All DBs
Position
B21:25289770..25323028
Genome browser
AA seq
2445 aa
AA seq
DB search
MNRFLVKLTLLTAASLGTVAQGQRCSEHCQNGGICELKPSGEASCRCPADFVGPQCQFPN
PCSPSQCLNGGTCRTRMKGNDLELFCDCMLGYSGPLCLTPVNNICMGSPCRNGGTCSLLT
LETFTCRCPPGWSGKTCQQADPCASNPCANGGQCSAFESHYICSCPPNFHGQTCRQDVNE
CALSPSPCRNGGTCINEVGSYLCRCPPKYAGTHCERLYHPCHPSPCRNGGTCLQTSDNTY
TCTCLSGFTGQTCEHNVDDCTQHACENGGRCIDGVNTYNCHCDKHWTGQYCTEDVDECEL
SPNACQNGGTCHNTIGGFHCVCVNGWTGDDCSENIDDCATAACSPGATCHDRVASFFCEC
PHGRTGLLCHLDDACISNPCQKGSNCDTNPVSGKAICTCPPGYTGSACNQDIDECSLGAN
PCEHGGRCLNTKGSFQCKCLQGYEGPRCEMDVNECKSNPCQNDATCLDQIGGFHCICMPG
YEGVFCQINTDDCASQPCLNSGKCMDKINSFHCECPKGFSGNLCQLDVDECSSTPCKNGA
KCTDGPNKYTCECTPGFAGAHCELDINECVSSPCHYGVCRDGVAAFTCDCRPGYTGRLCE
TNINECLSQPCRNGGTCQDRENAYTCTCPKGTTGMNCEINIDDCKSKPCDYGKCIDKINS
YECVCEPGYTGSMCNINIDDCALNPCHNGGTCIDGVNSFTCLCPEGFRDATCLSKHSECS
SNPCIHGSCLDQISSYRCMCEAGWTGRNCDININECLSNPCVNGGTCKDMTSGYMCTCRA
GFSGPNCQTNINECASNPCLNQGSCIDDVAGFKCNCMLPYTGEVCESVLAPCAPRHCKNG
GVCRESEDFQSFSCACPAGWQGQTCEVDINECVRNPCTNGGVCENLRGGYKCRCNPGFSG
DLCQNDIDDCEPNPCSNGGVCQDRVNGFVCVCLAGFRGERCSEDIDECVSAPCRNGGNCT
DCVNSYTCSCSVGFSGINCEINTPDCTESSCFNGGTCVDGINSFSCVCLPGFTGNYCQHD
VNECDSRPCQNGGTCQDGYGTYKCTCPHGYTGLNCQGLVRWCDSSPCKNGGSCWQQGASF
TCQCASGWTGIYCDVPSVSCEVAARQQGVPVAVLCRNAGQCVDVGNTHLCRCQAGYKGSY
CQEQVDECMPNPCQNGATCTDYLGGYSCECVPGYHGVNCSKEINECVSQPCQNGGACIDL
INTYKCSCPRGTQGVHCEIDVDDCSPAVDPLTGEPRCFNGGRCVDRVGGYGCVCPAGFVG
ERCEGDVNECLSDPCDPSGSYNCVQLNNDFRCECRTGYTGKRCETVFNGCKDTPCKNGGT
CAVASNTKNGYICKCQPGYSGSSCEYDAQSCGSLRCRNGATCVSGHLSPRCLCLPGFSGH
ECQTRMDSACLNNPCYNGGTCQPISDAPFFRCSCPSNFNGLLCHILDYSFKGGQGRDIAP
PEVEIRCEITQCEGRGGNAICDTQCNNHECGWDGGDCSLNFDDPWQNCSTALQCWRYFND
GKCDEQCANAGCLYDGFDCQRLEGQCNPLYDQYCRDHYADGHCDQGCNNAECEWDGLDCA
DDVPQKLAVGSLVLVVHIQPDELNNRSSSFLRELSGLLHTNVVFRRDANGEPLIFPYYGS
EHELSKHKRSDWTDPKRARRSLTEFTKPRLRRELDQMEIKGSIVYLEIDNRQCYQQSDEC
FQSATDVAAFLGALASSGNLNVPYIIEAVTSEDPPTKPGEMYPVFLVLLFLAVLALVAVG
VVVSRKRKREHGQLWFPDGFKVSEPKKKRREPVGEDSVGLKPLKNSDSSLMDEQLSEWAE
DDTGKRFRYEERSILDMSGQLDHRQWTQQHLDAADLRLNSMAPTPPQGEIENDCMDVNVR
GPDGFTPLMIASCSGGGLENENGEGEDDPSAEVITDFIYHGANLHNQTDRTGETALHLAA
RYARSDAAKRLLESCADANVQDNMGRTPLHAAVAADAQGVFQILIRNRATDLDARMHDGT
TPLILATRLAVEGMVEELINCHADPNAIDDSGKSALHWAAAVNNVDAAVVLLKNGANKDL
QNNKEETPLFLAAREGSYETAKVLLDHLANREITDHLDQHPRDIAQERMHHDIVRLLEEY
NLVQSAALPLSPPLCSPNTYLGIKPSPGGANNNNTAKKARKPSSKGVGGKDGGKDMRMKK
KKPGEGKNGGIMEGGVLSPVDSLESPHGYLSDVSSPPTMTSPFQQSPPITLNHLQGLADN
HMGGALQSLGKPFDSAPPPRLSHLPVANNGGGAQTAACDWLQRVQQQQQQQHGFPTMMPT
MLSATNMPQVMGYPTLQSSHLGMQSHMIPNHAHQNMAPMQHQNSAASGHALSHHFLGDLS
GLDLQSGSGHAPIQTILPQESQRMAPPISSTQFLTPPSQHSYSNPMDNTPSNQLQVPDHP
FLTPSPGSPDQWSSSSPHSNLSDWSEGISSPPTSMQMNHIPEAFK
NT seq
7338 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtttcttggtgaaattaacgctactgacggcagcatcgctcgggacggtggcg
caagggcaaagatgctcagaacactgtcagaatggaggaatatgtgaactcaagccgagt
ggagaagcatcatgcaggtgtcctgcagacttcgtcggcccccagtgtcagttcccgaac
ccctgcagcccgtcgcagtgtctcaacggaggcacgtgtcgcacacggatgaagggcaat
gacctggagctgttctgtgactgcatgctgggatacagcggcccgctctgtctgacgcct
gtcaataacatctgcatgggctctccgtgccgaaacggcgggacatgctctctgctcacg
ctcgagacctttacctgccgctgcccacctggatggtcaggtaaaacatgccaacaggct
gacccgtgtgcgtcgaacccctgtgccaacggcgggcagtgttcagcgttcgagtcgcac
tacatctgcagctgccctccgaacttccacggacagacgtgtcggcaggacgtgaacgag
tgcgccctctcgccctccccctgccgaaacggaggcacctgtataaacgaggtgggctcg
tacctgtgccgctgcccacctaaatacgccggcacacactgtgagcgcctctatcacccg
tgccacccctcgccctgcagaaacggaggcacctgcttacagaccagtgacaacacctac
acctgcacctgtctgtcagggttcacgggtcagacgtgcgagcacaatgttgacgactgc
acccagcacgcctgtgagaacggaggcaggtgtatcgatggcgtaaacacctacaactgc
cactgcgacaaacactggaccggtcagtactgtacggaggacgtggacgagtgtgagctc
tctcctaacgcctgtcagaacggaggaacgtgtcacaacaccatcggtgggtttcactgc
gtgtgtgtgaacggctggacgggagacgactgcagtgagaacatcgatgactgcgccacc
gctgcgtgttcaccgggagccacctgccacgacagagtcgcctccttcttctgcgagtgt
ccacacggacgcacaggtcttctgtgtcaccttgatgacgcctgcatcagtaacccatgt
cagaaaggctcaaactgtgacacgaacccagtgagtggaaaagccatctgcacctgtccg
cccgggtacacgggatccgcctgcaaccaagacatcgatgagtgctcgctcggcgcgaac
ccatgtgagcacggcggacggtgtctcaacactaaaggctcgttccagtgcaagtgtctc
caaggttatgaaggtccacgctgtgaaatggacgtcaacgagtgcaagtcgaacccctgc
cagaacgacgccacctgcctcgaccagatcggtggattccactgcatctgcatgccaggt
tacgagggagtgttttgtcaaataaacacagacgactgtgcatcacaaccttgcctcaac
agtggaaaatgcatggacaagatcaactcgttccactgcgaatgtcccaaagggttctct
gggaatctgtgtcagttggatgtggacgagtgctccagcacaccgtgtaaaaatggcgct
aaatgcacagacggacccaacaaatacacctgcgaatgcactccaggatttgctggcgct
cactgtgagctggacatcaatgagtgtgtgtcgagcccttgtcattacggtgtgtgtcgg
gacggggtggccgctttcacctgtgattgtcgcccaggatacacgggccgcctgtgcgag
accaacataaacgagtgcttgagccaaccctgccgaaacggaggcacctgccaggaccga
gagaacgcgtacacctgtacctgtcctaaaggaaccacagggatgaactgtgagataaac
attgatgactgcaagagtaagccgtgcgactacggaaagtgcatcgacaagatcaacagc
tacgagtgtgtgtgtgaacccggatacacaggctcaatgtgtaacatcaacattgacgac
tgcgcgttgaacccgtgtcacaatggcggcacgtgcatcgacggcgtcaacagcttcacc
tgcctgtgtcccgagggtttccgtgatgccacctgcctctccaaacacagcgagtgctcc
agtaacccctgtatccacggcagctgcctggaccagatcagcagctacagatgcatgtgt
gaggccggctggacgggacgcaactgcgacatcaacatcaacgagtgtctgtccaacccg
tgcgtgaacggaggcacctgtaaggacatgaccagcggctacatgtgcacctgcagagcc
ggcttcagcggtcccaactgccagacaaatattaacgagtgtgcgtccaacccctgccta
aaccaaggctcctgcatcgatgacgtggccggattcaagtgtaactgcatgctgccttac
acaggcgaggtgtgtgagagtgttttggctccctgtgctccacgtcattgtaagaacgga
ggtgtgtgtcgcgagtctgaggatttccagagcttctcttgtgcttgtcctgctggatgg
caaggtcagacgtgtgaggtggatattaacgagtgtgtgaggaatccttgcactaacgga
ggagtgtgtgagaacctgcgcggaggatataagtgccgctgcaaccccggattcagcgga
gatctgtgccagaacgacatcgacgactgtgagccaaatccgtgcagtaacggcggtgtg
tgtcaggaccgtgtgaacggctttgtgtgtgtgtgcttggctggattccgtggagagcgc
tgttcagaggacatcgacgagtgtgtgagcgccccctgccgaaacggagggaactgcacc
gactgcgtcaacagctacacctgcagctgctctgtaggattcagcggcatcaactgtgag
atcaacacccccgactgcaccgagagctcttgttttaatggcggcacatgtgtggatggc
ataaactctttctcatgcgtgtgtttgccgggattcaccgggaattactgccagcatgac
gttaacgagtgtgactcgcgaccgtgtcaaaacggaggcacttgtcaggacggatacggc
acctacaaatgcacctgtccacacggatacactggactcaactgccagggtctggtgcgc
tggtgtgactcgtccccctgtaagaacggaggctcatgttggcagcagggggcgtctttc
acctgccagtgtgccagcggctggacgggcatctactgtgacgtccccagtgtcagctgt
gaggtcgctgccaggcagcaaggagtgcctgtggccgttctgtgccgtaacgcgggtcag
tgtgtagacgtggggaacacacacctgtgcagatgccaggccggatacaagggcagctac
tgtcaggagcaggtggacgagtgcatgccgaacccctgccagaatggagccacctgcacc
gattacctgggaggatacagctgtgagtgcgttcctggatatcacggagtcaactgtagt
aaggagataaacgagtgtgtgtctcaaccctgtcagaacggaggagcctgcatcgacctc
atcaacacgtacaaatgctcctgtccgcggggaacgcaaggggttcactgtgagattgac
gtcgatgactgttccccggccgtggatccgttaaccggcgagccgcgctgttttaacgga
ggccgatgtgttgaccgtgttggaggctatggctgcgtgtgtccggctgggtttgtgggc
gagcgatgtgagggcgatgtcaacgagtgtctgtctgacccctgtgaccccagcggatcc
tacaactgtgtacagctcaacaacgacttccgctgcgagtgccgtacaggatacaccggc
aagcgctgtgaaacggtgttcaacggttgcaaggacacaccatgcaaaaacggaggaaca
tgtgctgtagcaagcaacaccaaaaacggatacatctgcaagtgtcagccgggttactct
ggctcctcctgtgaatatgacgcccagtcctgcggctccctgcgatgtcgtaacggtgct
acctgtgtctcgggacacctgagtcctcgctgtctctgtctgccgggcttcagcggacac
gagtgtcaaacacgcatggactcggcctgcctcaacaacccctgctacaacggcggcacc
tgccaacccatcagcgacgctccgttcttccgctgctcctgtccatccaacttcaacgga
ctcctctgccacatccttgattactccttcaaaggagggcagggccgagacatcgccccg
ccggaggtggagatccggtgtgaaatcactcagtgtgaaggcaggggtggaaacgccatc
tgtgatacccagtgtaacaatcacgagtgcggatgggacggcggcgactgctctctgaat
ttcgacgacccgtggcagaactgtagcaccgctctgcagtgctggaggtacttcaacgac
ggcaaatgtgacgagcagtgcgccaacgctgggtgcctttatgatggattcgactgccaa
agactggaggggcagtgcaatccgctgtacgatcagtactgtagggatcactatgcagat
ggtcactgcgatcagggctgtaataacgccgagtgtgaatgggacggtctggactgcgct
gatgacgttcctcagaaactggccgtgggaagtctggttctagtggtccacatccaacca
gacgagcttaacaaccgctcctcgtctttcctccgcgagctgagcggactgctgcatact
aacgtggttttccgccgcgacgctaacggagagccgctcattttcccgtactacggcagc
gagcacgagctgagcaagcacaagcgctctgattggacggacccgaagcgcgccaggaga
agcctgacggagttcacgaagccccgcctacgacgagaactcgatcagatggagatcaaa
gggtctatcgtgtatctagagattgacaaccgtcagtgttaccagcagtctgacgagtgt
ttccagagcgccacggatgtggcggcgttcctcggagcgctggcctccagcgggaatctc
aatgttccttacatcatcgaggccgtcacaagtgaggacccccccacaaagccaggggag
atgtaccccgtgttcctggtgctgctgtttctggcggttctggcgctggtggctgtgggt
gtcgtggtctccaggaagaggaagagggaacacgggcagctttggttccccgacggattt
aaagtctcagaacccaaaaagaaacgaagggaaccggttggagaggattctgttggactc
aagcctctgaaaaactcggacagctctctgatggacgaacaactgagtgaatgggcagaa
gacgacacgggcaaacggtttcggtatgaggagcggtctattctggacatgagcggtcag
ctggatcaccgacagtggacgcagcagcacctggacgcggctgacctgcggctgaactct
atggctccgactccaccacagggcgagatcgagaacgactgcatggacgtcaacgtccgc
gggcctgacggtttcactccgctgatgatcgcgtcgtgcagcggcggaggtctggagaac
gaaaacggcgagggagaagacgatccctctgctgaagtcatcactgacttcatctaccac
ggcgccaacctgcacaatcagacggaccggacgggcgagaccgcgctgcacctggccgcc
cgctacgcccgctcggacgccgccaaacgcctgctggagtcgtgcgcggacgctaatgtt
caggacaacatgggccgcacgcctctccacgccgctgttgcagctgacgctcagggagtc
ttccagattcttattcggaaccgagcgacggatctggacgcccgtatgcatgatggaacg
actccgctgatcctggccacccgattggctgtcgagggaatggtggaagagctcattaac
tgccatgcagatcccaacgctattgatgattctggtaaatctgctcttcactgggcggct
gcagttaataacgtggacgctgctgtcgttcttctgaagaatggagccaataaagaccta
cagaataacaaggaggagacgccacttttcttggctgctcgcgagggaagttacgaaacc
gctaaagtcctgcttgatcacctggccaaccgtgagatcacagatcacctagatcagcat
ccacgcgacatcgcgcaggagcgcatgcaccacgacatcgtacgtctgttagaggaatac
aacctggtccagagtgccgcgctgcctctatcgccccctctctgctcgcccaacacctac
ctgggcatcaaacccagcccgggtggtgccaacaacaacaacacagccaagaaagcgcgg
aaaccaagcagtaaaggcgtaggagggaaggacggcggaaaagacatgagaatgaaaaag
aaaaagcctggagagggcaaaaatggaggcattatggaagggggcgtcctctcgcctgtc
gattcgctggagtcgccccacggttacctgtcggatgtctcgtccccgcctacgatgaca
tcaccatttcagcagtccccgcccatcactttgaatcatctccaaggattggccgacaac
cacatgggcggagctcttcagagcttagggaagccgtttgactccgcccctcctcctcgc
ttatcgcatctgccagtggctaacaatggaggcggagctcaaacggcggcatgcgattgg
ctgcaaagggttcagcaacagcaacagcaacagcacggcttcccaaccatgatgcccaca
atgctttctgccacgaatatgccgcaggtcatgggttatcccacattgcaaagcagccac
ctcggcatgcagtcgcacatgattcccaaccacgcccatcagaatatggcgccaatgcag
caccaaaacagcgctgcctctggccacgccctttctcatcacttcctaggtgacttaagt
gggctggatcttcagtccggctcaggacacgcccccatccagaccatcctaccgcaggag
agtcagcgcatggctccgcccatttctagcacacagtttctgactccgccttctcaacat
agctattccaaccctatggacaacactcccagtaaccagctgcaggttcccgaccacccg
ttcctcacaccctcccctggatctcccgaccaatggtcaagctcgtctccacattccaac
ttgtctgattggtcagagggcatctcgagcccacccaccagtatgcagatgaaccatatc
ccagaggccttcaagtag
DBGET
integrated database retrieval system
