KEGG   Carassius gibelio (silver crucian carp): 127985810
Entry
127985810         CDS       T08819                                 
Name
(RefSeq) lissencephaly-1 homolog B
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib00565  Ether lipid metabolism
cgib01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    127985810
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cgib03036]
    127985810
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cgib04147]
    127985810
Chromosome and associated proteins [BR:cgib03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    127985810
Exosome [BR:cgib04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   127985810
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st EIF3I WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_EML_2 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_SCAP Beta-prop_EML Beta-prop_Nup120_160 Beta-prop_Vps41 WDR90_beta-prop_4th Beta-prop_DCAF4 WD40_RFWD3 LisH Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_IFT140_1st LisH_PAC1 Beta-prop_DCAF12 eIF2A Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Nucleoporin_N Beta-prop_NUP159_NUP214 Ge1_WD40 Pox_A_type_inc Beta-prop_WDR11_2nd ARMC9_LisH LisH_2 SutA-RBD DUF2570
Other DBs
NCBI-GeneID: 127985810
NCBI-ProteinID: XP_052443938
LinkDB
Position
B21:10112278..10134408
AA seq 410 aa
MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEITLGGPVGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF
SLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDLNGKLLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCMKTFTGHREWVRMV
RPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTISEATGSE
NKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDK
TLRIWDYKNKRCMKTLSAHEHFVTSLDFHKTSPYVVTGSVDQTVKVWECR
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggtgttgtcacagaggcaacgagatgaactaaatcgagcaatagcagattatttgcgc
tctaatggctatgaagaagcatattctgtttttaagaaggaagcagagttggatatgaat
gaagagttggacaagaagtatgcaggccttttggaaaagaaatggacttcagtcatcaga
ttacaaaaaaaggtaatggagttggagtccaaactaaatgaagctaaggaagagatcact
ttaggaggccctgtgggacagaaacgagaccccaaagagtggatcccacgcccgcctgag
aagtacgccctcagcggccacagaagccccgtcacacgcgtcatcttccaccctgtgttc
agcctcatggtctccgcctccgaggacgccactataaaggtttgggactatgaggctggg
gatttcgagcgtaccctgaagggtcacactgactcagtgcaggacatctcctttgatctg
aatggaaagctgctggcttcttgctccgcagacatgaccatcaaactctgggacttccag
ggctttgagtgcatcaggaccatgcacggacatgatcacaatgtgtcgtcagttgccatc
atgcccaacggtgatcacatagtgtctgcttccagggataagaccattaaaatgtgggag
gtggccactggctactgtatgaagacgttcacgggtcacagggagtgggtgcgtatggtc
cggcccaatcaagacggcacactattggccagctgctctaatgaccagacggtgcgcgtg
tgggtggtggccaccaaggagtgcaaggcggagctgcgggagcacgagcatgtggtggag
tgcatttcctgggcccctgagagcgcacaccccaccatatctgaggctacaggttctgag
aacaagaagagtggaaagcctgggccattcctgctatccggatccagagacaagaccatt
aaaatgtgggacataagtactggcatgtgcctcatgacactggtcggtcatgataactgg
gtgcgtggagtgctgttccatcctggtgggagatttgtagtgagctgtgctgatgacaag
accctgcgcatctgggactataagaacaagcgctgcatgaagactctgagtgcccatgaa
cactttgtgacctctctggatttccacaagacttctccttacgtggtgacaggaagtgta
gatcaaacggtgaaagtgtgggaatgtcgctga

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