Carassius gibelio (silver crucian carp): 127985863
Help
Entry
127985863 CDS
T08819
Name
(RefSeq) retinoic acid receptor RXR-alpha-A isoform X1
KO
K08524
retinoid X receptor alpha
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03320
PPAR signaling pathway
cgib04148
Efferocytosis
cgib04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
127985863
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
127985863
03320 PPAR signaling pathway
127985863
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127985863
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cgib03310
]
127985863
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
127985863
Nuclear receptors [BR:
cgib03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
127985863
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
127985863
NCBI-ProteinID:
XP_052444016
LinkDB
All DBs
Position
B21:complement(19292988..19436418)
Genome browser
AA seq
524 aa
AA seq
DB search
MDPFCLDMHMGFLKPQCSIPPPPQRGRAEACTCFSGMCALHQRRLSTDLLIPRTPQCDDP
FRRTPFLKYKDSSGQVTASPLSSPTSHRGMHPSLLSPTSLGPSGSLHSPISSLNSPMNGL
GSPFSVISSPMGPHSMASPGMGYGPSISPQLNSPMNSVSSSEDIKPPLGINGVMKVPAQP
SGTPLSLTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDSKDCIIDKRQ
RNRCQYCRYQKCLAMGMKREVLLHTAVQEERQRAKERNENEVESTSSANEDMPVEKILEA
ELAVEPKTETYIETNVPMPSNSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQV
ILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMR
DMQMDKTELGCLRAIVLFNPDSKGLSNPGEVEALREKVYASLEAYCKQKYPEQPGRFAKL
LLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggatcccttctgccttgatatgcacatggggttcctgaaaccccagtgctcgatacca
ccgccacctcagagaggacgagcagaagcatgcacgtgtttcagcggaatgtgtgccctt
catcaacgcaggctttctacagacttgttaataccaaggaccccccaatgtgatgatccc
tttagacggactcccttcctaaaatataaagactcctcgggacaggtgacagcctctcct
cttagctcacccacgtcccaccgggggatgcatccgtcactgctgagcccgacttcattg
ggcccctcggggtctctgcactcccccatcagctctctgaactcacccatgaacggcctt
ggctctcccttttctgtcatcagctcgcccatggggccacattccatggcgtcacccggg
atgggctacggccccagcatcagcccacagttgaattcgcccatgaactctgtcagcagc
tcagaagatatcaagccgcccctgggcatcaacggtgtgatgaaggtgccagcccagccc
tcgggcacccctctttccctcaccaaacacatctgtgccatctgtggcgaccgctcctca
ggtaaacactacggtgtgtacagctgcgaggggtgcaagggtttcttcaagaggactgtg
cgtaaggacctgacctacacttgtcgagacagcaaggactgtattatcgacaaacgccag
cgcaaccgctgccagtactgccgctatcagaagtgtttggccatgggcatgaagagagaa
gtattattacatacagccgtccaggaggagcgccagcgagccaaggaacgcaacgagaac
gaggtggagtcgaccagcagtgcgaacgaagacatgcctgtggagaagatcctggaggcg
gagcttgctgtggagcccaaaacggagacttacattgaaaccaatgtaccgatgccctca
aattcacccaatgatccagtcacgaacatctgtcaggctgcagacaagcagctcttcact
ctcgtggaatgggccaagaggatcccgcatttttccgagctcccgctggacgaccaggtc
attcttctacgagcaggatggaatgagctcctcattgcgtcattttcacaccgttcaata
gcagtgaaagatgggatactgttggccacaggactgcacgtgcaccggaacagcgcccac
agtgccggagtaggggccatatttgacagggtgctgacggagttggtgtcaaagatgaga
gacatgcagatggataaaacagagctaggatgccttcgagccatcgtcctcttcaatcca
gactccaaaggcctgtcaaacccaggtgaggtggaggcgctgagagagaaggtctatgcc
tctctggaagcctactgcaaacagaaataccctgaacaacctggaaggtttgctaagctg
ttgctgcggctccctgccctgcgttcaattggactgaagtgtttggagcatctgttcttc
ttcaagctcataggggacactcccatcgataccttcctcatggagatgctagaggcgccc
caccaaatgacataa
DBGET
integrated database retrieval system
