Carassius gibelio (silver crucian carp): 127985896
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Entry
127985896 CDS
T08819
Name
(RefSeq) protein NLRC3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cgib04054
]
127985896
Pattern recognition receptors [BR:
cgib04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
127985896
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NACHT
FISNA
NLRC4_HD2
PRY
NOD2_WH
SPRY
LRR_6
FAM176
Vfa1
LRR_4
Nop53
Trypan_PARP
DUF2956
Motif
Other DBs
NCBI-GeneID:
127985896
NCBI-ProteinID:
XP_052444060
LinkDB
All DBs
Position
B21:27861577..27870695
Genome browser
AA seq
979 aa
AA seq
DB search
MYRGEIHEQIRSDPVLQKHTLDTGDLQRVKEQHKTSMKNKYERLFEGIKLQENESLLNSI
YTQLYIIEGEREGVNEEHEVLQMEKTARTQHSQDTPIYCNDIFKASAEAGSEEKEQIKTV
LTKGIAGIGKNVSVQKKRKNRKRKRKKKRKEEEEEQEQEKEKEKEKEKEKEKQIKTVLTK
GIAGIGKTVSVQKFILDWAEGKANQDVDFMFVLPFRELNLIRDHQYSLHRLLLDFHPELQ
DLDSQIYEQCKVVFIFDGLDESRITLMFSDAQKVCDVTETSSVAVLMSKLMKGELLPSAL
IWITSRPAAANQIPSKYIHRLTEIQGFTEPQKEEYFRKRISDEHQASRIISHIRRARSLH
IMCHIPVFCWISSTVLQKLLEEDLRAEIPQTLTEMYIHFLLIQINMRKQKYEERDPEKLL
PSNREVIVKLAEVAFKQLMKGNVMFYEEDLIESGIDVTDASVYSGICTEIFKQESVIHQR
KVYSFIHLSFQEFLAAFHVFYYHMNTTMEILKNFASIQNLLNAAVDNAIESKNGRLDLFL
RFLLGISLESNQRLLQDLLTHTENSSESIRRTTQYITEKIKDGHGLSTERSINLFLCLLE
VKDQTLSREIQEFVKSDKHSEKKLSAAHCSTISYMIQMSEETLDELDLMKYNTSDEGRRR
LIPAVINCRKALLAGCNLTAQSCEIVSSALQSSHSVLRELDLSNNDLQDSGVKLLSYGLK
SPNCQLQILRLSGCMVTEEGCGYLSSALSSNPSHLRELDLSYNHPGDSGVQLLKHHLEDP
NYRLEKLNLDHGEPFRITPGLKKYACDLTLDPNTANYHLILSKDNRKITRVKEPQSYPDH
PDRFKHHEQVLCKERLTGRCYWEAEWDKGGVDIAVTYKEIINRGGSCNRWFGNSDKSWSL
YCSVNEFTIWRNNKSSNISVPSYSKRVGVYVDVSAGTLSFYSVSETHTLTHLHTFNTTFT
EPLYAGFRVYESSLSLCQF
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgtacaggggagaaatacatgagcagatcagatctgacccggtcctgcagaaacacaca
ctggacacaggagacctgcagagagtcaaagagcagcacaaaaccagcatgaagaacaag
tatgagagattatttgagggaatcaaactccaggagaatgaaagcctcctgaacagcatc
tacacacagctctacatcatagagggagagagagaaggagtgaatgaagaacatgaggtt
ttacagatggagaaaacagccagaacacaacactcacaagacactccaatctactgcaat
gacatctttaaagcctccgctgaagcaggatctgaggagaaagagcagatcaagactgtt
cttactaaaggcatcgctggaatcggaaaaaacgtctctgtgcagaagaagaggaagaat
aggaagaggaagaggaagaagaagaggaaggaggaggaggaggagcaggaacaggagaag
gagaaggagaaggagaaggagaaggagaaggagaagcagatcaagactgttcttactaaa
ggcatcgctggaatcggaaaaaccgtctctgtgcagaagttcattctggactgggccgag
ggaaaagccaatcaggatgtagatttcatgtttgtgcttccatttcgagagctgaacttg
atccgagatcatcagtacagtcttcacagacttctgctggactttcatcctgaacttcaa
gatctggactcacagatttatgagcagtgtaaagttgtgttcatctttgatggtctggat
gaaagcagaatcacactgatgttttcagatgctcagaaagtgtgtgatgtgactgagact
tcatcagtggctgtgttgatgtcaaagctgatgaaaggagagctgcttccctctgctctc
atctggatcacctccagaccagcagcagccaatcagatcccctccaaatacatccaccgt
ctgacagagattcagggattcactgagcctcagaaggaggaatatttcaggaagagaatc
agtgatgagcatcaagccagcagaatcatctcacacatcagaagagcaagaagcctccac
atcatgtgccacatccccgtcttctgctggatatcatccactgtgcttcagaagctcctg
gaagaagatctgagagcagaaatccctcaaactctgactgaaatgtacatccacttcctg
ctgattcagatcaacatgaggaagcagaagtatgaagagagagatccagagaaactcctg
ccgtccaacagagaagtgattgtgaaacttgctgaagtggctttcaaacagctgatgaag
ggcaatgtgatgttctatgaggaggacctgattgagagcggcatagacgtcactgacgcc
tcagtgtattctgggatttgcactgagatctttaagcaggaatctgtgattcatcagagg
aaagtctacagcttcattcatctgagctttcaggagtttctcgctgctttccatgtgttt
tactatcatatgaatacaactatggaaatacttaagaatttcgcttcaatacaaaatttg
cttaatgcggcagtagataatgccattgagagtaagaatggacgtctggatctgttcctg
cggttcctgctgggcatctcactggagtccaatcagagactcttacaggatctactgaca
cacacagagaacagctcagaaagcatcaggagaaccacacagtacatcacagagaagatc
aaagatggacatggactctccactgaaagatccatcaatctgttcctctgtttgctggaa
gtgaaagatcaaactctgtccagagagattcaggagtttgtgaaatcagacaaacactca
gagaagaaactctctgctgctcactgctcaacaatctcctacatgattcagatgtcagag
gagacactggatgagctggacctcatgaaatacaacacatcagatgaggggagaagaaga
ctgataccagctgtgatcaactgcagaaaagcacttcttgctggctgtaatctcactgct
cagtcctgtgaaattgtgtcatcagctctacaatcctcacactctgtcctgagagaactg
gatctgagtaacaatgaccttcaggattcaggagtgaagctgctctcttatggactgaag
agtccaaactgtcaactgcagatactgcgtttgtctggctgtatggtgacagaggaaggc
tgtggttatttgtcttcagctctgagttcaaacccttcacacctgagagagctggatctg
agctacaatcacccaggagattcaggagtccagctgctcaaacaccatctggaggatcca
aactatagactggagaaactcaatttggatcatggagaacctttcagaatcacacctgga
ctgaaaaaatatgcgtgtgatctcacactggatccaaacacagcaaactatcatctcatc
ctgtctaaggacaacagaaagattacacgtgtgaaagagccacagtcgtatcctgatcat
ccagacagatttaagcaccatgagcaggtcctctgtaaagagcgtctgactggacgctgt
tactgggaggctgaatgggacaagggaggggttgatatagcagtgacctataaagaaatc
ataaatagaggaggcagttgtaatcgttggtttggaaacagtgataaatcctggagtctg
tactgctctgttaatgaatttactatctggcgcaataataagagcagtaatatatcagtc
ccttcatactctaagagagtaggagtgtatgtggatgtgtcggccggtactctgtcattc
tacagcgtctctgaaacacacacactcacacacttacacacattcaacaccacattcact
gaacccctgtatgctggatttagggtttatgaatcctcactgtctctgtgtcagttttaa
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