Carassius gibelio (silver crucian carp): 127985953
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Entry
127985953 CDS
T08819
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 6-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib00061
Fatty acid biosynthesis
cgib00071
Fatty acid degradation
cgib01100
Metabolic pathways
cgib01212
Fatty acid metabolism
cgib03320
PPAR signaling pathway
cgib04146
Peroxisome
cgib04216
Ferroptosis
cgib04920
Adipocytokine signaling pathway
Module
cgib_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
127985953
00071 Fatty acid degradation
127985953
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
127985953
09143 Cell growth and death
04216 Ferroptosis
127985953
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
127985953
03320 PPAR signaling pathway
127985953
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cgib01004
]
127985953
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgib04147
]
127985953
Enzymes [BR:
cgib01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
127985953
Lipid biosynthesis proteins [BR:
cgib01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
127985953
Exosome [BR:
cgib04147
]
Exosomal proteins
Exosomal proteins of breast milk
127985953
Exosomal proteins of breast cancer cells
127985953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
127985953
NCBI-ProteinID:
XP_052444126
LinkDB
All DBs
Position
B21:4717605..4748632
Genome browser
AA seq
722 aa
AA seq
DB search
MLGFALVAGSVWVVLELSSTLMEKMQSRDLLLGLQLPELDDLGQFLRSLPTSALLGLGAL
TAVLTYWISTRPRPITPPCDLRLQSQEVQKEDGARRSMMGDSSTLLSYYHEDAKTLYEVF
QRGLHISGDGPFLGSRLPDQPYTWLSYREVLSRAELLGSGLLSQGCQSSPDQFIGVFAQN
RPEWIISELACYTYSMVVVPLYDTLGPDAIRYIINTAEISTVICDKAEKAAVLLENVQRG
ETPCLKTIVLMDVFDAPLLEEAQKSGILIRSLRDVEALGRENYRKPVPPGPDDLSIVCFT
SGTTGNPKGVMLTHGNIIADFGGFLKVTDKVIFPNQDDVLISFLPLAHMFERLIEAVVIC
HGGRIGFFQGDIRLLSDDMKALRPTIFPVVPRLLNRMYDKIFSQANTPLKRWLLNFAAKR
KGLEVKRGVIRCNSVWDKIFFHKIQASLGGRLRMIITGAAPASPTVLDFLRAALGCQVYE
AYGQTECTAGCTYTTPGDWTAGHVGAPLPCNLIKLVDVAEKNYFAAKGEGEICVKGPNVF
KGYLKDPVRTAETLDADGWLHTGDIGKWLSNGTLKIIDRKKHIFKLAQGEYISPEKIESI
YIRSEPVSQLYVHGDSLQSCLVGVIVPDPEVLPSWAQKKGFVGSYDELCGNKELKKAILE
DMVRLGKASGLHSFEQVKDIHIHKEMFSIQNGLLTPTLKSKRPELKQYFKTEIEQLYSNI
SM
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgctcggcttcgcgttagtggctggctctgtctgggttgtgttagagctcagctccacg
cttatggagaagatgcagtctcgggatctgctgctgggtcttcagcttcctgagctggat
gatttgggtcagttcctgcgctctctgcccacctcggctctgctgggtctgggtgccctg
accgctgtgctgacctactggatctccacccggccgcggcccatcacaccaccctgcgac
ctccggctccagtcacaggaagtgcagaaggaggatggtgctcgaaggtccatgatgggc
gacagctccacgctgctctcgtattatcacgaggacgccaagaccctgtacgaggtgttc
cagcgcggcctgcacatctccggtgacgggccgttcctcggctccagactcccagatcaa
ccctacacctggctgtcctacagagaggtgttgagccgcgctgagctcctgggctccggt
ctgctgtctcagggatgtcagtccagtccagatcagttcatcggggtgtttgcacagaac
cggcccgagtggatcatctcggagctggcgtgctacacgtactcgatggtggtggtgcct
ctgtacgacacgctcggacccgacgccatccgctacatcatcaacacagcggagatctcc
acagtgatctgtgataaagcagagaaagcggcggtgctgctggagaatgttcagagagga
gagacgccgtgtctgaagaccatcgtcctcatggatgtgtttgatgctccgctgctggag
gaggctcagaagagcggcattctcatccgctcgctccgagacgtggaggctctgggtcga
gagaactacaggaaacctgtgccacccggaccagatgacctgtccatcgtgtgcttcacc
agcggaaccacgggaaacccgaagggagtgatgctgacccatgggaacatcatcgcagac
ttcggcggcttcttgaaagtgacagataaggtgatctttccgaaccaagacgacgttctc
atttccttcctgcctcttgctcacatgttcgagaggctgattgaggcggtggtcatctgt
cacggcgggaggattggctttttccaaggtgatatccgtctgctttcggacgacatgaag
gctctccggcccaccatattcccagtggtcccccgactcctgaaccgcatgtatgacaag
atcttcagtcaggctaacactcctctgaagcgctggctgctgaacttcgctgcgaagagg
aaagggctggaggtgaagcgcggcgtgatccgctgcaacagcgtctgggacaagatcttc
ttccacaagatccaggccagtctgggtggcaggttacggatgatcatcaccggagcggct
cctgcgtctccgaccgtgctggacttcctgagagcggcgctgggctgtcaggtgtacgag
gcgtacggtcagacggagtgcaccgctggatgcacctacaccacccctggagactggacg
gccggtcacgtaggtgctccgctgccctgtaatctcattaaactggtggatgtggctgag
aagaactactttgctgctaaaggagaaggagagatttgtgtgaaaggcccaaacgtcttc
aagggttatctgaaggatcctgtgaggacggctgagacgctggacgcagacggatggctt
cacactggagacattggcaaatggctgtcgaacggcacgctgaagatcatcgacaggaag
aagcacatcttcaagttagctcaaggagagtatatttccccggagaagatcgagagcatc
tacatccgcagcgagcccgtgtctcagctctatgttcacggggacagcctgcagtcgtgt
ctggtgggagtcatcgtccccgatcctgaggtcttaccctcctgggctcagaagaagggc
ttcgtgggaagctatgacgagctgtgtggaaataaagaactgaagaaagccattctggag
gacatggtgcgtttgggaaaagccagtggtctccattcatttgaacaggttaaagacatc
cacatccataaggaaatgttctccatacagaacggattgctgacccccactttaaagtcc
aagagaccggagctgaagcagtacttcaagacagaaatcgagcagctgtacagcaacatc
tccatgtag
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