Carassius gibelio (silver crucian carp): 127986126
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Entry
127986126 CDS
T08819
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cgib03009
]
127986126
Enzymes [BR:
cgib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127986126
Ribosome biogenesis [BR:
cgib03009
]
Eukaryotic type
90S particles
Helicases
127986126
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
PAS_11
Motif
Other DBs
NCBI-GeneID:
127986126
NCBI-ProteinID:
XP_052444312
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All DBs
Position
B21:complement(15634032..15655449)
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AA seq
847 aa
AA seq
DB search
MRDKKDKAKTQIDDDPVKNFEKWKRKYNKTKKRVQKVQKSTKKRDYEVEREVIQKLVNKY
SEINPKEAVKFSDFPLSKKTLKGLHEAQYRQPTEIQRQTIGFALQGRDVLGAAKTGSGKT
LAFLIPVLECLYREQWTAMDGLGALIISPTRELAYQTFEVLRKVGKHHEFSAGLVIGGKD
LKDESEKIHRTNIIICTPGRMLQHMDETATFHASDLHMLVLDEADRILDMGFADTLNAII
ENLPKTRQTLLFSATQTKSVKDLARLSLKNPEYVWVHEQAKFSTPATLEQNYVVCELHHK
VNMLFSFLRSHVKKKIIVFFACCKEVQYLFRVFCRLRPGISVLALHGKQQQMKRVEVYND
FVRKTSAVLFATDIAARGLDFPAVNWVLQFDCPEDGNTYIHRVGRTARYKEGGEALLVLL
PSEEKGMIAQLQEKKVPINKIKVNPEKLVCVQQKLEAFLAQEKEQKERAQRCFVSYLRSV
YLMKNKDVFDVFQLKLPEYAMSLGLAVAPRVRFLSKAQQQKSGVTEDHRGAAGHESEDEL
KSFKAQLKGEQSQSSQSEDDDEDDGDEEETKPAALLCGFNEEDEDDQNDQDLLTVKRKDV
FNINEESQDEEEDTDAKSKIKKQKESKFKDAKKIQKKSFKVNTKKIFTEEGEVVQQWPPL
QKTMVPDEEEEEETSGINVEAAKERLRKEDQEFDKIEYRRKIKEKHREKRLKEKAARREA
SKQHKEEKKGDDDDDDDDEEEEEEEVVAYLSGANEEFDPSTLPDPDKVRNSESSSEEEEG
DSSDRGGRKRSFSSDSSEDDDDSDDEVQQTQVGKKKPRKESTVTPLDTGLSLAEDEELVL
HLLGSHS
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgcgggataaaaaggataaagctaaaacgcagatagacgatgaccctgtgaagaatttt
gagaaatggaaaaggaaatacaacaaaaccaagaaacgagtccaaaaagttcaaaagagc
accaagaaacgcgactatgaggtggagagagaagtcatacagaagctggtgaataaatac
tccgagatcaatcccaaagaagctgtgaagttctctgattttccactctcaaaaaagact
ctgaaaggtcttcatgaggctcagtacaggcagcccacagagattcagaggcagacgatt
ggcttcgctttgcaagggagagatgttcttggtgctgcaaagactggctctggaaagact
ctggccttcctcatcccagttttggagtgcttgtaccgtgaacagtggactgcgatggat
ggcctcggcgccctcatcatctctcccacccgagagctggcctatcagaccttcgaggtg
ttgaggaaggtcggcaagcaccatgaattttctgctggtcttgtaatcggtggaaaggat
ctgaaagatgaatcagaaaaaatccatcgcaccaatatcattatctgcaccccaggacgt
atgctgcagcacatggacgagacggccacctttcatgcttcagatctccacatgcttgta
cttgatgaagccgacagaattctggacatgggtttcgccgacacactcaatgccattatt
gaaaaccttccgaaaacacggcagacccttctcttctctgccactcagaccaagtctgtc
aaagatctggccagactgagcctgaagaacccagagtatgtgtgggtccatgagcaggcc
aagttcagtacaccagccactctggaacagaactatgtggtgtgtgagctgcaccataaa
gtcaacatgctcttctcatttttgaggagtcatgttaagaagaagatcattgtgtttttt
gcttgctgcaaagaggttcagtatctgttcagggtcttctgccggttgcgtccaggtatc
tccgtacttgctttgcatggaaaacagcagcagatgaagagggtggaggtttataatgac
tttgtccgcaagacctcagccgtcctctttgccacagacatcgctgccagaggacttgac
ttccctgctgtgaactgggtgctgcagtttgactgtcctgaagatggaaacacatacatc
cacagggtgggcagaacagccaggtataaggagggaggcgaagctcttcttgtcctattg
ccgtcagaggagaagggcatgattgcacagcttcaagagaagaaagttcccattaacaaa
atcaaggtgaacccagagaagttggtgtgcgtccagcagaagttggaggccttcctggca
caggagaaggagcagaaggaacgagcacagaggtgttttgtgtcctacctccgctccgtc
tatctgatgaagaacaaagacgtctttgatgttttccagctcaaactcccagaatatgca
atgtcactgggtttggcggtggctccgcgggtccgtttcctcagtaaggcccagcagcag
aagagtggggtgacggaggaccacagaggcgctgcaggacacgagtctgaagacgagctc
aagagtttcaaagcccaactcaaaggagagcagtctcagtcctcacagtctgaggatgat
gatgaggatgatggtgatgaggaggagacgaagcctgcagctctgctatgtggctttaat
gaagaggatgaggacgaccagaatgatcaggacctactgactgtcaagcgtaaagatgtg
ttcaatatcaatgaagagagccaggatgaggaggaggacacagatgctaagtccaagatt
aagaaacaaaaggaatccaaattcaaagacgcaaagaaaatccagaaaaagagcttcaag
gtcaacactaagaagatcttcactgaggagggagaggtggtgcagcaatggcctccattg
caaaagaccatggtaccagatgaagaggaggaggaggagacgtctggcattaacgtggaa
gcagccaaagagcggcttcgcaaggaagaccaggagtttgacaagatcgagtaccgtcgt
aaaatcaaggagaaacatagggagaaaagactgaaggagaaagcagctcgaagggaagcg
agcaaacagcataaagaggagaagaaaggtgatgatgacgacgacgacgatgatgaggag
gaggaggaggaggaggtggtagcgtatctgtcaggtgccaatgaagaatttgaccccagc
acacttcctgatcccgacaaagtgcgcaactctgagtcctcctctgaggaggaagaaggc
gattcatcagaccgaggtggcaggaagagaagtttcagcagcgacagcagtgaggatgat
gatgatagcgatgatgaagtacagcagacacaggtgggcaagaagaagcccaggaaggag
tccacagtaactcctctggacactggcctctcactggctgaagacgaggagctcgtgttg
catttattgggcagtcacagctag
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