Carassius gibelio (silver crucian carp): 127986144
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Entry
127986144 CDS
T08819
Name
(RefSeq) dynein, axonemal, intermediate chain 1, paralog 2 isoform X1
KO
K10409
dynein axonemal intermediate chain 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
127986144
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cgib03037
]
127986144
04812 Cytoskeleton proteins [BR:
cgib04812
]
127986144
Cilium and associated proteins [BR:
cgib03037
]
Motile cilia and associated proteins
Dynein arm
127986144
Cytoskeleton proteins [BR:
cgib04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
127986144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
WD40_WDHD1_1st
Beta-prop_RSE1_2nd
WDR55
EIF3I
Beta-prop_NUP159_NUP214
WD40_RFWD3
MIOS_WD40
Beta-prop_TEP1_C
Beta-prop_SPT8
Beta-prop_ELP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
127986144
NCBI-ProteinID:
XP_052444341
LinkDB
All DBs
Position
B21:19020449..19250854
Genome browser
AA seq
660 aa
AA seq
DB search
MSVPHKVGTVKSRQAPNVNTHQKAAVAKSVKAIGKKKEEEEGLDTAEGEEWMQGKTLVKP
PDQLDLTEAELNEEITRVLKASNPNAPQNIVRYSFKEGCYKPIVFVDQMAIHFELEGNLV
HKETDEGRRLMAKQAEVDDGGGAERSDNVAIRAGKREQKLTNQFNFNERASQTLNNAPRD
ISCQTEPPPRANFSATANQWEIYDFYVEELQRREKSKEKHESQFLNKEEDKSKKKMIQTE
TQNDDISQLAKAVKIIERMVNQNIFDDVAQDFMYFEDASDEFRGEKGTLLPLWTFQYDKA
KSLSVTALCWNHKYNDLFAVGLGSHEFTQQGGGMLLFYTLKNPSYPEFIFNTASGVMCLD
IHEHLSYLVAVGLYDGCVAVYNLKKKTDQPIYDSRASSGKHTSAVMQVKWQKDDLDSNHN
FISVSADGRLVSWTLVKHELVFTDIIKLPVIDTIPDDLKDIIPTVGTSLDFHKQKDYNFL
VGTEHGKIHKGSKYYSSKFLEKYDAHFMTVTRVRWNPFHPDVFISCGWDWMVKIWDQTMK
SPVFTFELKTSVTDVAWAPYSSTVFAAVTTDGKVHVFDLNINKYEALCQQKVVSKKTKLL
HIEFNPVHPIIIVGDDRGHVTSLKLSPNLRKKPKEKKGQELPKGPEVEITKMEQLLSSLR
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttcctcacaaagttgggacagtgaaatctagacaggcacctaatgttaacacc
caccaaaaggcagctgtggcaaagagtgtcaaagccattggaaagaagaaggaggaagag
gaaggtttagacacagccgaaggagaggaatggatgcaggggaagactctggtgaagcct
ccagaccagctggacttaactgaggcagagctgaatgaagagattaccagagtactcaaa
gcaagcaatccaaatgctccacaaaacatcgtcagatatagtttcaaagagggctgctat
aaaccaatcgtctttgtggatcagatggctattcactttgaactagaagggaatcttgtg
cacaaggaaactgatgaaggtcggagattgatggctaagcaagctgaagtggatgatggt
ggaggagctgagaggtcagacaatgtggccatcagagctggcaagagagagcagaaactc
accaaccagttcaacttcaacgagagagcctctcagacactaaacaatgctccaagagac
ataagttgtcaaactgagcctcctcctcgtgcaaacttctcagcaacagccaatcagtgg
gagatttatgacttttacgtagaggaacttcaaaggcgggagaaaagtaaagagaagcac
gaaagccagttcctaaataaggaggaggacaagagcaagaagaagatgattcaaactgag
actcagaatgatgacatatcccaactagctaaggcggtcaagatcattgagcgtatggtg
aatcaaaatatatttgatgacgttgcacaagatttcatgtactttgaggatgcatctgat
gaatttagaggagagaagggcactcttctcccactatggacgtttcagtatgataaagcc
aaaagtctgtctgtgactgccctctgctggaatcacaaatacaacgatttgtttgccgtt
ggtcttggttctcatgaattcactcagcaggggggtggcatgcttctcttctacaccctg
aaaaacccaagttacccagaattcatctttaacacggcctcaggagtaatgtgtttagac
atccatgaacatttgtcctacctggtggctgtgggattgtatgacggctgtgtcgcagtg
tacaacctgaagaaaaagactgatcagcctatttatgacagcagagccagctctggcaaa
cacacaagtgctgtgatgcaggtgaagtggcagaaagatgatttggacagtaatcacaac
ttcatctctgtgtctgctgatggacggctggtgtcttggactctggtgaagcatgaacta
gtcttcacagacattatcaagctcccagtcattgacacaattccagatgacttgaaggat
atcattcctacagttggaacatctttggacttccacaaacaaaaggactacaactttctt
gttggcactgagcatggaaagattcacaagggctctaaatactattctagcaagttcctg
gaaaaatatgatgcccacttcatgactgtcactcgtgtgaggtggaatcccttccatcct
gatgtcttcatctcttgtggctgggactggatggtcaaaatttgggatcaaactatgaag
tctcccgttttcacctttgaactgaaaacttcagtgacagatgtagcctgggctccatac
tcctctactgtctttgctgctgtcaccactgatggaaaggtccatgtgttcgacctcaac
atcaacaaatatgaggctctctgccagcaaaaagtggtgtccaagaagaccaagctcttg
cacatcgaattcaaccctgtccatcccatcatcatcgtgggcgatgaccgcggccatgtc
accagcctcaagctctctcccaacctccgcaagaagcctaaggagaagaagggtcaggaa
ttgccgaaggggccggaggtggaaataacaaagatggagcaactgttgagctcactgagg
tag
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