Carassius gibelio (silver crucian carp): 127986201 Help Entry 127986201         CDS       T08819                                  Symbol si:ch211-196i2.1 Name (RefSeq) collagen alpha-1(I) chain   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism cgib  Carassius gibelio (silver crucian carp) Pathway cgib04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:cgib00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     127986201 (si:ch211-196i2.1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:cgib00536]     127986201 (si:ch211-196i2.1) Glycosaminoglycan binding proteins [BR:cgib00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    127986201 (si:ch211-196i2.1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI Laminin_G_2 Laminin_G_3 Laminin_G_1 Motif Other DBs NCBI-GeneID:  127986201 NCBI-ProteinID:  XP_052444425 LinkDB All DBs Position B21:21005841..21076016 Genome browser AA seq 1817 aa AA seqDB search MMLASVLWTAVLFTLVKASVLNSGPTEAPDEESGSGMLLTEAIDLLDHLWQVANHSNASV TQESQRCPVLHVGQYSTLSIPLRQVFGHRFGDEFSLLLHLRSPQSEDRSVLTFLCPDGHI LLQIRISAYTFTFISTQQRHYEFPVAVLSDGGWHRVAVSVSSGRLALYVDCSMVESVDWA YKDDLGISTDGLVMVGGIIEGFETPFEGDLMQVAFLMGEPDAARDQCVVLQPQCGGTGHK PPRSPRIHTEEELLLSSNDLEDLLEAVEDSDSIRAKLTGLHRRGIIRGDGTLPTGSKRPV FVVRGDVFEVDEDTDLVDQNILSKNGGKPSKTVPTETTGSRDGKPDSTSKRLDENITTDK HKSGKPSPKKPVDTTIINLDVQVPEKPTGSIVPTSEIHLETTSRPEDRESNLLKEDLGAT TQAPVRTTSWEEISKGSGRKTSKTPDIPVGHGWGSEEHPGTVILTGRHRDLVRGSDGNMY RIQRGPMGPVGPRGEPGCPGSDGYPGPKGDKGVIGLKGRPGHRGVPGSPGPPGLPTFYLW RNTPEEWAAFQQTSFFQLLRAGWPRAQGPPGPEGEMGKPGPQGPPGEPGEQGRPGRLGDM GDRGPKGVMGRAGLFGKDGENGLDGPQGPPGIPGPKGPLGYKGESGLPGEKGEEGIAGPE GPCGDMGKVGEKGSKGAAGSLGPVGPSGPQGMRGLEGPEGHPGPDGDDGMEGPPGLPGPP GAPGWTGVVGAQGPNGSRGEPGPPGAVGLPGPQGPHGLEGQIGSPGPRGPQGLSGREGLP GPKGEPGPAGPLGLRGEPGFEGLMGVLGIQGSKGFTGIKGNRGPDGDQGDIGPKGNKGAR GAPGIQGIQGEQGPTGFPGFQGVRGLPGPHGIQGEDGEAGPHGKVGKEGQKGSKGLEGLP GKPGPRGVKGRTGQRGHTGMPGLPGLPGPTGPVGAEGKPGTQGLQGLVGNAGSKGLMGLQ GIPGERGQDGPPGSMGPRGREGPMGSLGPTGERGFPGKTGAVGPQGPVGMYGFPGNVGMR GRPGHSGDRGEPGLRGTPGPTGKPGPPGPPGPVGEKGPPGPQGRQGDPGHRGTDGPCGPP GLHGVSGVIGKQGPHGSKGPPGDPGPNGPPGTPGPQGANGLPGIDGEKGEKGMMGQPGDA GPLGLEGPQGTSGPAGLEGPSGRKGDKGDRGPFGKPGLQGPKGDIGPPGVKGPMGPPGPA GSEGDAGPVGVAGGPGSEGQKGDIGPRGFTGLEGPWGVVGEKGERGLKGDKGQIGLQGES GLMGGVGPPGLKGVEGGPGHPGLVGPDGPPGSKGEVGPNGLLGEPGDTGPEGIAGPKGVR GDAGKAGTQGGVGSVGPQGLLGPKGLPGPEGEKGDSGDKGETGVEGPDGLQGIQGPPGLP GLEGPQGEAGGCGSPGLPGAQGRMGNPGPEGREGMKGEKGNQGKDGTPGKMGHIGRRGKR GKAGLRGTRGPRGEKGERGDVGEKGLPGWGGSMGIQGLRGDPGDQGVKGAEGEKGDQGPL GPPGKDGLKGSIGPIGPPGPPGPKGDQGNIGPAGPRGAPGIPGLPGLFGDKGLKGFHGPP GPPGRRGLPGPPGPPGPAGVSVNLTLTQIKDLMYSSDKPNYPLIQTLLDSLYHDLRLLVD PPDGSKQHPASTCLELWLCHPNYTSGFYYIDPNQGSPLDALLAYCNFSESGAETCLHPRD AHLPIRTWLNDSGNNSKFYWFSSLEGGFQFEYPALSVVQLRFLRLQSNRAEQRVTYSCYP GQRLGQTQRQVQFLTDSGKQSYLGELQDCVSAKEVDPGPRESVFQFEDMDLLPLRDIGFL GNSSYEFGFTIGPVCFS NT seq 5454 nt NT seq  +upstreamnt  +downstreamnt atgatgctcgcatcagtactgtggacagctgttttatttactcttgtaaaagcctccgtc ctgaacagcggtccaactgaagcaccagatgaggagagcggctctgggatgctgttgaca gaagcaatagaccttcttgatcatctgtggcaggtggctaatcacagcaacgcatcagta acacaggaaagccaaagatgtccagtcctgcatgtaggccagtactccaccctctctata ccactacggcaggtgtttggacacaggtttggtgatgagttcagtctgctgttgcatctg cgtagcccccagtctgaagaccgaagtgtgctaactttcctctgtccagatgggcacatt ctactgcagattcgcatcagtgcctacacttttacctttatcagtacccaacaacgacac tatgagttccctgtggcagtgctgtctgatgggggttggcaccgcgtggcggtcagcgtc tcctcgggccggttggcattgtatgtggattgctccatggttgagagcgtggactgggct tacaaggacgatttgggaatctccactgatggcctggttatggtgggaggaatcattgag ggttttgagacaccttttgagggtgatctgatgcaagtggcatttctgatgggagaacca gacgcagctcgagatcagtgtgtcgttttgcaaccccagtgtggcggaaccggacacaaa ccacctcgctctcctcgcatacacactgaagaggaacttctgctgtcctcaaatgacctg gaagacttattagaggcagtagaggacagtgactctattcgtgcaaaactgactggtctc catagacgtgggattatacgtggtgatggtactctgcctactggatccaaacgtcctgtc tttgtggtccgaggtgatgtgtttgaggtggatgaggatacagacctggtagaccaaaac atcttgtccaaaaatggtggtaaaccttccaaaactgtcccaactgaaactacaggcagc cgtgatggaaaaccagactccacatccaaacgtttagatgaaaacatcaccaccgacaag cacaaatccggcaaaccttcaccaaagaaaccagtggataccacaattatcaacctggat gttcaggtacctgagaaacctaccggaagtattgtacccactagtgagattcatctggaa accacctccagacctgaggatcgagaatccaacttgttaaaagaggatttgggggccacc acacaggctcctgtgagaacaacttcttgggaggaaatctcaaaaggaagtggaagaaaa acatccaaaactccagatatccctgtaggacacggctggggatctgaggagcacccaggt accgttatacttacaggaaggcatagagatcttgtgcgtggctctgatgggaacatgtat cgcattcaaagaggacccatggggccagtggggccccgaggtgagcctggatgtcctggg agtgatggctatccaggacccaaaggtgataagggtgtcattgggcttaagggccgtcca ggtcaccgtggtgtcccaggatctcctgggccacctgggctgcccacattctacctgtgg agaaacacacctgaggaatgggctgcatttcagcaaacttcattcttccagcttctccgt gcaggttggcctagagcgcaaggtccgcctggtccggaaggagagatggggaaacccggg ccgcaggggccacctggggagccaggtgaacaaggacgtccaggacgtttgggagacatg ggtgaccgtggcccaaaaggtgtaatgggtagagcagggctctttggaaaggatggagaa aatgggctggatggacctcaggggcccccagggattccaggaccaaagggtcctttaggc tataaaggagaatctggcttacctggagagaaaggagaggagggcattgctggaccagag ggtccatgtggagatatgggaaaagtcggtgagaaaggttcaaagggtgcagctggctct cttggtcctgtcggcccttctggtccacaaggcatgagagggttggagggccctgaaggt catccagggccagatggggatgatgggatggagggaccaccagggctcccaggtccacca ggagctcctggttggacaggtgtggttggtgcccaggggcctaatgggtctcgtggggag cctggccctccaggagctgttggtcttccaggaccacagggtccccatggattagaagga cagatcgggtctccgggaccaaggggtccacaggggctgtcaggccgggaagggttacct ggtcccaaaggagaacctggccctgcagggccattgggcctcagaggggagccagggttt gaaggattaatgggtgtattaggaatacaaggttcaaaaggttttactggtatcaaagga aacagaggacctgatggagaccagggagacattggacctaaaggaaacaaaggtgctaga ggagccccagggatacagggcattcaaggtgagcagggaccaacaggctttcctggtttc caaggtgtccgaggtctgccaggaccacatgggatccagggagaggatggagaagctggt ccgcatggcaaagtgggaaaggaggggcaaaaggggagcaaaggtcttgaaggcctccct ggaaagcctggtcctagaggcgtgaagggtcgaacagggcagaggggtcacactggcatg cctggacttcctggtttacctggcccaactggacctgttggagctgaaggaaagcctggt acacagggactgcaaggccttgtgggtaatgcaggaagtaaaggactaatgggattgcaa ggtattcctggagaacgtggtcaagatggacccccaggatctatgggaccacgtggacgg gaggggcctatgggcagtcttgggccaacaggagagaggggtttccctggaaagacagga gcagtgggaccgcagggccctgttggcatgtatggttttccaggaaacgtgggtatgaga ggaagaccgggccacagtggagacagaggagagccaggtctaagagggactcctggacca actgggaagcctggaccaccaggtccccctggtccagtaggagaaaagggaccaccagga ccccagggccgtcaaggagatcctgggcatcggggaacagatgggccatgtggtcctcca ggacttcatggggtcagtggggtcattggaaaacaaggacctcatggaagtaaaggaccc ccaggggaccctgggccaaatggtcccccaggtactccaggtccacagggagcaaatgga ctgccaggtatagatggggagaaaggagaaaagggaatgatgggccaacctggtgatgcc gggcctcttggactggaagggccacagggtacatctggtccggcaggtttggaggggcct tctggaagaaaaggtgataagggggacagaggtccctttggaaagcctggtcttcaagga ccaaaaggagacattggccctccaggtgttaaaggtccaatgggtccaccaggcccagca ggaagtgagggtgatgctggtccagttggcgttgctggtggtcctggctctgaaggacag aagggtgatattggcccacgaggatttactggtttagaggggccatggggggttgtgggg gagaagggagagagggggctcaagggagacaagggccagatcggactccagggtgagtca ggcctcatgggtggtgttggacctcctggcctaaaaggtgtagagggtggaccaggccat ccaggattggtggggcccgatggacctccgggaagcaagggagaggttgggccgaatggt ttgcttggtgagccaggagatactggacctgagggaattgctggtcccaaaggcgtgcga ggtgatgcaggaaaagctgggacacagggaggtgttggctcagtaggtccccaaggtctt ttgggccctaaaggtctcccagggcctgaaggggagaaaggagactcaggagataaagga gaaactggggtggagggtccagacggccttcaaggtattcaaggaccaccgggactgcct ggtttggagggtccccaaggtgaggcagggggatgtggctcaccaggtctgccaggagct cagggccgcatgggtaacccaggacctgaaggaagagaaggcatgaaaggagagaagggg aatcaaggcaaagatggaactcctggaaaaatgggtcacattggacggaggggtaaaaga ggcaaggcagggttgaggggcaccagaggaccaagaggagaaaagggagagaggggggat gtaggagagaaaggacttcctggatggggaggaagtatgggaatccaaggactgagagga gatcctggggatcaaggtgtcaaaggagcagagggtgagaaaggagatcagggaccactt ggtccaccagggaaagatggcttgaaggggagtataggacctattggtcctcctggaccc ccaggaccaaaaggagatcagggaaatattggtcctgctgggcctagaggggcacctgga atacctggactaccgggcttgtttggagacaagggactaaagggatttcatggccctcct ggaccccctggaaggaggggtttgccaggtccaccggggccaccagggcctgctggtgtt tctgtgaacctgaccctgacccagatcaaggatctgatgtacagttcagacaagcccaat taccctctgattcaaacactgctggactctttataccatgacctccggctgctggtggac cctccagacggtagcaagcagcacccagcctctacctgtctggagctgtggctgtgccat cccaactacaccagcggattctactatattgacccaaaccaaggcagtcctttagatgct cttttggcctactgtaacttctcggagtcaggagcagagacctgccttcaccccagagat gcacatcttcccataaggacttggctgaatgactcagggaataacagcaagttctactgg ttcagttcactagagggaggttttcaatttgagtatccagccctcagtgtggttcagctg cggttcctacgactccagagcaacagagcagaacagagggtgacgtactcctgttaccct ggacagcgactgggccagacacagcgacaggtccagttcctcacagactccgggaagcag agctatttaggagaactgcaggattgtgtgtctgcaaaggaagtggatcccggaccacgc gagtctgtgtttcagttcgaggacatggacctgcttcctctacgtgacattggattcttg ggcaacagcagctacgagtttggcttcaccatcggccctgtgtgtttcagctag

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