Carassius gibelio (silver crucian carp): 127986231
Help
Entry
127986231 CDS
T08819
Name
(RefSeq) pre-mRNA-splicing factor RBM22 isoform X1
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127986231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgib03041
]
127986231
Spliceosome [BR:
cgib03041
]
Complex B
Other components
Prp19-related factors
127986231
Complex C
127986231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
RRM_1
zf_CCCH_4
Torus
Nup35_RRM_2
RRM_occluded
zf-CCCH_2
RRM_3
zf-CCCH
zf-CCCH_4
RRM_7
zf-CCCH_10
Calcipressin
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
127986231
NCBI-ProteinID:
XP_052444457
LinkDB
All DBs
Position
B21:12159184..12163364
Genome browser
AA seq
424 aa
AA seq
DB search
MATSLGSNTYNRQNWEDSDFPILCQTCLGENPYIRMTKEKFGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGLSVKDEVPRSDVNKEYYTQN
MEREIANSDGTRPVGLLGKAPSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVANKLLTRASSMPRLDLPEDKSITTLYIGGLG
EDVTDSELRNHFYQFGEIRTITIVQRQQCAFIQFATRQAAETAAEKSFNKLIINGRRLNV
KWGRSQAARGKEKDGVTESGIRLDPVPGLPGALPPPPVSDEDASNNYFNLAPTSSHAVMN
LGLPPPPGVAMPPPPGFGPPMFHTMDPMAPPMPPPMAMRPPGQVHYPSQDPQRMGAHASR
HGGP
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtctttaggttctaacacttacaacagacaaaactgggaggattcggatttt
ccgattctctgccaaacatgtttgggagaaaacccttacatccggatgaccaaagagaaa
tttggcaaggagtgcaagatctgtgcacgtcccttcactgtgttccgctggtgtcctggg
gtccggatgcgcttcaagaagacagaagtttgtcagacctgcagtaaaatgaaaaatgtc
tgtcaaacctgccttttggatctggaatacggtttgcccattcaggttcgtgacactggg
ctgtccgttaaagatgaagtaccgagatccgacgtaaataaagagtattacactcagaat
atggagagagagattgctaactctgatggcacacgacctgtggggctgcttgggaaggca
ccgagcagcagcgatatgctgctgaaactggctcgtaccacaccatattacaagaggaac
agaccacacatctgttccttctgggtgaagggggagtgcaagagaggggaagagtgtcca
tacaggcatgagaagcccaccgatccagatgacccgttggctgatcagaacattaaggac
cgttattatggcattaacgatcctgtggctaacaaactcctgacgcgggcctcctccatg
cccagactggacttaccggaggacaagtccatcaccacactctacatcggaggcctggga
gaagacgttacagattctgagctcaggaaccacttctaccagtttggggagattcgtacc
atcaccatcgttcaaaggcagcagtgtgctttcatccagtttgctacacggcaggctgca
gagacggctgccgagaagtcctttaataaactcattattaatggacgtcgacttaatgtt
aaatggggcaggtcacaggcggctcgaggaaaagagaaggatggggtgacggagagtgga
atcaggctagatccagtgcccggcctccctggtgctctgcccccaccccctgtgtctgat
gaagatgcctccaacaactacttcaacctggctcccaccagctcccatgctgtcatgaac
ctgggacttcctcctccacctggggttgccatgcccccaccgcctggcttcggtcctcct
atgttccacaccatggatcccatggccccgccgatgccccctccaatggccatgaggccc
cccggacaggtgcactacccatcccaggatcctcagcggatgggtgcccatgcaagtcgc
catggaggcccttag
DBGET
integrated database retrieval system
