Carassius gibelio (silver crucian carp): 127986246
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Entry
127986246 CDS
T08819
Name
(RefSeq) ras-related protein Rab-39B
KO
K07925
Ras-related protein Rab-39B
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127986246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127986246
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
cgib04031
]
127986246
Membrane trafficking [BR:
cgib04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
127986246
GTP-binding proteins [BR:
cgib04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
127986246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Gtr1_RagA
GTP_EFTU
AAA_22
TniB
Motif
Other DBs
NCBI-GeneID:
127986246
NCBI-ProteinID:
XP_052444474
LinkDB
All DBs
Position
B21:13333134..13337254
Genome browser
AA seq
213 aa
AA seq
DB search
MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL
QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEEARSHVQPHSIVFLL
VGHKCDLEQQRQVSQQEAEKLAAAYGMRYVETSARDAINVERAFTELTRDIYDLVKSGEI
TIQEGWEGVKSGFVPNVVHSSEEVTKSDRRCLC
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggaagctatatggctgtaccagttccggctgattgtcattggcgactcgacggtgggg
aagtcttgtttgatcagacgcttcacagaaggacgttttgcacaggtgtctgatcctact
gttggcgtagacttcttctcccgtctggtagagattgaaccgggcaaacgcatcaagctt
cagatctgggacacggcaggccaagagagattcagatctatcacaagggcttattatcgt
aattcagtgggtggccttttgcttttcgacatcaccaaccgccgctccttccagaatgtc
cacgagtggctggaggaagcgcgcagtcatgtgcagccgcacagcattgtcttcttactg
gtgggccacaagtgtgacctggagcagcagcggcaggtgagccagcaggaggccgagaaa
ctggcagccgcttacggcatgcgctacgtggagacctcggcgcgcgacgcaataaacgta
gagagggcctttacggagctgacgcgcgatatctacgacttagtcaaaagtggtgagatc
accatccaggagggctgggagggcgttaagagcggtttcgtgcccaacgtggtgcactca
tccgaggaggtgaccaagagcgaccgccgctgcctctgttga
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