Carassius gibelio (silver crucian carp): 127986481
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Entry
127986481 CDS
T08819
Name
(RefSeq) cysteine protease ATG4A-like isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04136
Autophagy - other
cgib04140
Autophagy - animal
cgib04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
127986481
04140 Autophagy - animal
127986481
04136 Autophagy - other
127986481
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cgib01002
]
127986481
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127986481
03029 Mitochondrial biogenesis [BR:
cgib03029
]
127986481
Peptidases and inhibitors [BR:
cgib01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
127986481
Membrane trafficking [BR:
cgib04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
127986481
Mitochondrial biogenesis [BR:
cgib03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
127986481
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
127986481
NCBI-ProteinID:
XP_052444706
LinkDB
All DBs
Position
B21
Genome browser
AA seq
326 aa
AA seq
DB search
MLRCGQMILAQALVCRHLGRDWRWDPEKHQPKEYHRILHCFLDKKDSCYSIHQMAQMGVG
EGKSVGEWYGPNTVAQVLKQLALFDDWNTLAVYVSMDNTVVIEDIKKQCKQPGRESRSRA
GPCGRGEEPASGQSCSETLHLQSQRPLDWRPLLLVIPLRMGINSINPVYIQAFKECFKMP
QSCGVLGGKPNLAYYFIGFIDDELIYLDPHTTQQAVDTESGSSVDDQSYHCQRTPHRMKI
TSLDPSVALGFFCKSEEDFDSWCDLVQQELLKKRNLRMFELVEKHPSHWPPFVPPTKPDV
QTTGAEFIESPDKLFESEEEFEILNV
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgctccgctgtggacagatgatcctcgcgcaggctttggtctgcaggcacctcggtcga
gactggagatgggatccagagaaacatcagcccaaagagtatcatcgcatcttgcactgc
tttttagacaagaaggatagctgctactctattcaccagatggctcagatgggtgttgga
gagggcaagtctgttggagaatggtatggacccaacacagtggctcaagtactcaagcaa
cttgctctgtttgatgactggaatacactggctgtgtatgtctcgatggacaacaccgtt
gtgattgaagacatcaagaaacagtgtaagcagccaggccgggaaagcaggtccagggct
ggtccctgtggccgaggagaagagccagcgtcaggccagagctgttcagagacacttcac
cttcagtcccaaaggcccctggactggaggcccctgctgctggtcatccctctgcgaatg
ggcatcaacagcatcaaccccgtctacattcaggccttcaaagagtgttttaagatgcct
cagtcatgtggtgttttgggaggaaagcccaacctcgcctattattttattggatttatt
gatgatgagttgatctatctggaccctcacaccacgcagcaggccgtggacactgaatca
ggcagttctgtggacgaccagagctatcactgtcagaggaccccacaccgcatgaagatc
actagcctggacccgtctgtcgcgctgggttttttctgcaagagtgaggaggactttgac
agctggtgtgatctggttcagcaggagctcctcaagaaaagaaatctgcggatgttcgag
ctggtggagaaacacccgtctcattggcctccgttcgttcctcccaccaaaccagatgtg
cagaccacaggagcagagttcatcgagtccccagacaagctttttgagtcagaagaggag
tttgagatcctaaatgtgtga
DBGET
integrated database retrieval system
