Carassius gibelio (silver crucian carp): 127986499
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Entry
127986499 CDS
T08819
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03440
Homologous recombination
cgib04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127986499
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
127986499
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cgib01002
]
127986499
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127986499
03036 Chromosome and associated proteins [BR:
cgib03036
]
127986499
03400 DNA repair and recombination proteins [BR:
cgib03400
]
127986499
Peptidases and inhibitors [BR:
cgib01002
]
Metallo peptidases
Family M67
127986499
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
127986499
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
127986499
BRISC complex
127986499
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
127986499
DNA repair and recombination proteins [BR:
cgib03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
127986499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
REP_ORF2-G2P
DUF7385
DUF6262
Motif
Other DBs
NCBI-GeneID:
127986499
NCBI-ProteinID:
XP_052444730
LinkDB
All DBs
Position
B21:7047602..7051335
Genome browser
AA seq
260 aa
AA seq
DB search
MAVSAVHLESDAFLVCMNHALSTEKEEVMGLCIGEVDTNRIVHIHSVIILRRSDKRKDRV
EISPEQLSAASTEAERLAEMTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFV
GLIFSCFIEDKNTKTGRVLYTCFQSVQAQKGSEYERIEIPIHVIPHEAIGKVCLESAVEL
PRILCQEEQDTYRRIHSLSHLDPITKIHNGSVFTKNLCSQMSAISGPLLQWLEDRLEQNK
QSIIKLQKEKEQLTQELASL
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgagcgctgtacatttagagtcagacgcatttctagtctgtatgaatcacgct
ctgagcacggagaaggaggaagtaatggggctctgcatcggcgaggtggacacaaaccgc
atcgtgcacatccattctgtcataattctgcgtcgatcagacaagaggaaagaccgagtg
gagatttccccagagcagctgtcagcagcgtccactgaggcagagaggttggctgaaatg
acaggacgtcccatgagggttgtgggctggtaccactctcatccacacatcactgtgtgg
ccatcacatgttgatgttaggactcaagcaatgtatcagatgatggaccagggttttgtt
ggactcatcttctcatgctttatagaagataaaaacacaaagactggtagagtcctgtac
acctgtttccagtcagtacaagcccagaaaggctcagagtatgagcggattgagatcccc
atccatgtaatcccacatgaagccatcgggaaagtgtgtctggagtctgctgtggagctg
cccagaatcctgtgtcaagaagaacaggatacatacagaaggattcacagtttatctcat
ctggatccaatcacaaagatacataatggatcagtgttcactaaaaacctgtgcagtcag
atgtcggccattagcggcccgctgctgcagtggctggaagaccgactggaacagaacaaa
caaagtatcatcaaactccagaaggagaaagagcaactgacacaagaactggcttcatta
taa
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