Carassius gibelio (silver crucian carp): 127986603
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Entry
127986603 CDS
T08819
Name
(RefSeq) replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03030
DNA replication
cgib03410
Base excision repair
cgib03420
Nucleotide excision repair
cgib03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
127986603
03410 Base excision repair
127986603
03420 Nucleotide excision repair
127986603
03430 Mismatch repair
127986603
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgib03032
]
127986603
03036 Chromosome and associated proteins [BR:
cgib03036
]
127986603
03400 DNA repair and recombination proteins [BR:
cgib03400
]
127986603
DNA replication proteins [BR:
cgib03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
127986603
DNA Replication Termination Factors
ELG1-RFC complex
127986603
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
127986603
DNA repair and recombination proteins [BR:
cgib03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
127986603
Check point factors
HRAD17(Rad24)-RFC complex
127986603
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_lid_RFC1
AAA_22
nSTAND_NTPase5
RCF1-5-like_lid
AAA_14
AAA_16
Mg_chelatase
Viral_helicase1
AAA_11
Rad17
RuvB_N
AAA_assoc_2
AAA_19
nSTAND3
AAA_24
MipZ
AAA_18
DNAX_ATPase_lid
ABC_tran
AAA_5
AAA_28
AAA_23
AAA_25
AAA_30
MeaB
SLFN-g3_helicase
NTPase_1
RNA_helicase
FtsK_SpoIIIE
AMP-binding_C_3
Motif
Other DBs
NCBI-GeneID:
127986603
NCBI-ProteinID:
XP_052444870
LinkDB
All DBs
Position
B21
Genome browser
AA seq
353 aa
AA seq
DB search
MDVEMKEADGEQNQTDGQPKKDDTAPKPSTNAYELPWVEKYRPLKLNEIVGNEETVSRLE
VFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPAMKDAVLELNASNDRGIDVVRNKIK
MFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPI
QSRCAVLRYSKLRDDQIMMRLTEVVEKENLHVTNDGLEAIIFTAQGDMRQALNNLQSTNS
GFGYINSENVFKVCDEPHPLLVKSMLEHCVNANIDEAYKIIEQLWSLGYSPEDIIGNIFR
VCKTFQMAEYLKLEYIKEIGYTHMKVAEGVNSLLQMAGLLGRLCSKTAAPDAS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggatgttgaaatgaaagaggcagacggtgaacaaaatcaaaccgacggacagcctaaa
aaggatgatactgcaccaaaaccctcaacaaatgcttatgaactaccatgggttgaaaaa
tacagacccctgaagctgaatgaaatagttggaaatgaggaaactgtcagcagactggag
gtgtttgcacgagaaggaaatgtgcccaacatcatcattgctggtcctcctggcactgga
aaaaccaccagcatcttgtgtttggcccgagctcttctgggtccagctatgaaagatgct
gtgcttgagctcaatgcctcaaatgaccgtggaattgatgttgtgagaaacaaaatcaaa
atgtttgcccagcaaaaggtcacactccctaaaggtcgccacaagatcataatcttggat
gaggctgacagcatgacagatggagcccagcaggctctcagaagaaccatggagatctac
tctaaaaccacacgctttgctctggcgtgtaatgcatcagataagatcatagagcccatc
cagtcccgctgtgcagtgctgcgttacagcaaactccgagacgaccagatcatgatgcgt
ctgaccgaggtggtagagaaggagaacttgcatgtcaccaatgacggcctagaggccatc
atcttcaccgctcaaggggacatgagacaggctttgaataacttgcagtcaacaaattct
ggatttggttacatcaacagtgaaaatgtgttcaaggtgtgtgatgagccacatcctctg
ctggttaaaagcatgctggagcactgtgtcaatgccaacattgatgaagcctacaagatc
attgagcagctttggtcactcggatactcaccagaggacatcataggaaacatctttaga
gtgtgcaaaacctttcagatggcagagtatttgaagctggaatatattaaggaaattggc
tacacacatatgaaagtggcagaaggggtgaactctctgttacagatggctggactgtta
ggtcgcctgtgcagcaagacggctgcacctgatgccagctaa
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